MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56537 bp
Accession: NZ_CP060459 Location: 1..56537 Organism: Xanthomonas citri pv. citri strain DAR73909 Replicon: plasmid pXAS56
Accession: NZ_CP060459 Location: 1..56537 Organism: Xanthomonas citri pv. citri strain DAR73909 Replicon: plasmid pXAS56
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8Z74_RS23740 () | 1..1221 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| H8Z74_RS23745 () | 1587..5471 | - | 3885 | WP_203179629.1 | TAL effector repeat-containing protein | - |
| H8Z74_RS23750 () | 5717..5938 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| H8Z74_RS23755 () | 6228..6764 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| H8Z74_RS23760 () | 6754..6966 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| H8Z74_RS23765 () | 6963..7214 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| H8Z74_RS23770 () | 7237..7569 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H8Z74_RS23775 () | 7569..7826 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| H8Z74_RS23780 () | 8032..8634 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| H8Z74_RS23785 () | 8618..8922 | + | 305 | Protein_9 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| H8Z74_RS23790 () | 9089..9247 | - | 159 | WP_011052952.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| H8Z74_RS23795 () | 9323..10490 | + | 1168 | Protein_11 | IS3 family transposase ISXac3 | Transposase |
| H8Z74_RS23800 () | 10517..13309 | - | 2793 | Protein_12 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| H8Z74_RS23805 () | 13354..14286 | - | 933 | Protein_13 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| H8Z74_RS23810 () | 14480..15535 | + | 1056 | WP_203179630.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| H8Z74_RS23815 () | 15662..16510 | + | 849 | WP_199822664.1 | type III effector | - |
| H8Z74_RS23820 () | 16631..16831 | - | 201 | WP_159066134.1 | IS66 family transposase ISPpu19 | Transposase |
| H8Z74_RS23825 () | 17020..17292 | - | 273 | WP_005918020.1 | IS66 family transposase ISAzo15 | Transposase |
| H8Z74_RS23830 () | 17286..17588 | - | 303 | WP_005923977.1 | IS66 family transposase ISDpr4 | Transposase |
| H8Z74_RS23835 () | 17728..18054 | - | 327 | WP_052462055.1 | TrbC/VirB2 family protein | - |
| H8Z74_RS23840 () | 18082..18372 | - | 291 | WP_017173636.1 | hypothetical protein | - |
| H8Z74_RS23845 () | 18606..18896 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| H8Z74_RS23850 () | 19633..19947 | + | 315 | Protein_22 | hypothetical protein | - |
| H8Z74_RS23855 () | 19988..20911 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| H8Z74_RS23860 () | 21126..21365 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| H8Z74_RS23865 () | 21365..21784 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| H8Z74_RS23870 () | 21789..24764 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| H8Z74_RS23875 () | 24783..25481 | + | 699 | WP_015462628.1 | UPF0149 family protein | - |
| H8Z74_RS23880 () | 25526..25672 | + | 147 | Protein_28 | transposase | - |
| H8Z74_RS23885 () | 25771..28990 | - | 3220 | Protein_29 | TAL effector repeat-containing protein | - |
| H8Z74_RS23890 () | 30897..31484 | + | 588 | Protein_30 | IS3 family transposase ISXac3 | Transposase |
| H8Z74_RS23895 () | 31515..32087 | - | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| H8Z74_RS23900 () | 32278..32538 | + | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| H8Z74_RS23905 () | 32535..32936 | + | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H8Z74_RS23910 () | 32961..33224 | + | 264 | WP_005917846.1 | hypothetical protein | - |
| H8Z74_RS23915 () | 33231..34418 | + | 1188 | WP_040150073.1 | zeta toxin family protein | - |
| H8Z74_RS23920 () | 34698..35924 | + | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| H8Z74_RS23925 () | 36729..37496 | + | 768 | WP_011052998.1 | ParA family protein | - |
| H8Z74_RS23930 () | 37510..38541 | + | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| H8Z74_RS23935 () | 38593..38922 | + | 330 | WP_011052996.1 | partition gene repressor | - |
| H8Z74_RS23940 () | 38926..39162 | + | 237 | WP_015462622.1 | Wgr family protein | - |
| H8Z74_RS23945 () | 39277..40364 | + | 1088 | WP_087944898.1 | IS3 family transposase ISXac2 | Transposase |
| H8Z74_RS23950 () | 40529..40744 | - | 216 | WP_155400515.1 | hypothetical protein | - |
| H8Z74_RS23955 () | 41134..42301 | - | 1168 | Protein_43 | IS3 family transposase ISXac3 | Transposase |
| H8Z74_RS23960 () | 42343..42621 | - | 279 | WP_203179628.1 | hypothetical protein | - |
| H8Z74_RS23965 () | 42620..42838 | + | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| H8Z74_RS23970 () | 42835..43161 | + | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H8Z74_RS23975 () | 43215..46190 | - | 2976 | WP_058967967.1 | Multifunctional conjugation protein TraI | Relaxase |
| H8Z74_RS23980 () | 46204..47779 | - | 1576 | Protein_48 | type IV secretion system DNA-binding domain-containing protein | - |
| H8Z74_RS23985 () | 48038..48379 | - | 342 | WP_031425612.1 | hypothetical protein | - |
| H8Z74_RS23990 () | 48578..49192 | - | 615 | WP_040150107.1 | hypothetical protein | - |
| H8Z74_RS23995 () | 49308..49601 | - | 294 | WP_040150110.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H8Z74_RS24000 () | 49598..49867 | - | 270 | WP_003490597.1 | hypothetical protein | - |
| H8Z74_RS24005 () | 49963..50358 | - | 396 | WP_003490599.1 | hypothetical protein | - |
| H8Z74_RS24010 () | 50845..52012 | - | 1168 | Protein_54 | IS3 family transposase ISXac3 | Transposase |
| H8Z74_RS24015 () | 52039..52416 | + | 378 | WP_059022860.1 | hypothetical protein | - |
| H8Z74_RS24020 () | 52413..53120 | + | 708 | WP_039587580.1 | hypothetical protein | - |
| H8Z74_RS24025 () | 53169..53522 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| H8Z74_RS24030 () | 53917..54126 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| H8Z74_RS24035 () | 54123..54431 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| H8Z74_RS24040 () | 54887..55513 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| H8Z74_RS24045 () | 55510..55833 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| H8Z74_RS24050 () | 55976..56290 | + | 315 | WP_173426676.1 | partition protein C | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|