MGE detailed information
MGE type: Prophage MGE length: 93906 bp
Accession: NZ_CP060388 Location: 314140..408045 Organism: Sphingobium sp. KCTC 72723 Replicon: chromosome
Accession: NZ_CP060388 Location: 314140..408045 Organism: Sphingobium sp. KCTC 72723 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPBM01_RS01640 () | 309142..309585 | - | 444 | WP_188063714.1 | hypothetical protein | - |
| SPBM01_RS01645 () | 309582..310478 | - | 897 | Protein_325 | glycosyl transferase family protein | - |
| SPBM01_RS01650 () | 310535..311056 | - | 522 | WP_188063715.1 | hypothetical protein | - |
| SPBM01_RS01655 () | 311058..311756 | - | 699 | WP_188063716.1 | adenylate/guanylate cyclase domain-containing protein | - |
| SPBM01_RS01660 () | 312330..312791 | + | 462 | WP_188063717.1 | hypothetical protein | - |
| SPBM01_RS01665 () | 312987..313244 | - | 258 | WP_188063718.1 | hypothetical protein | - |
| SPBM01_RS01670 () | 313277..313891 | - | 615 | WP_188063719.1 | hypothetical protein | - |
| SPBM01_RS01675 () | 314140..314565 | + | 426 | WP_188063720.1 | peptidase M15 | - |
| SPBM01_RS01680 () | 314562..314894 | + | 333 | WP_188063721.1 | endodeoxyribonuclease | - |
| SPBM01_RS01685 () | 315084..315830 | + | 747 | WP_188063722.1 | hypothetical protein | - |
| SPBM01_RS01690 () | 316128..317231 | + | 1104 | WP_188063723.1 | DNA-binding protein | - |
| SPBM01_RS01695 () | 317400..317813 | + | 414 | WP_188063724.1 | hypothetical protein | - |
| SPBM01_RS01700 () | 318216..319415 | - | 1200 | WP_037542386.1 | IS256 family transposase ISPso1 | Transposase |
| SPBM01_RS01705 () | 319798..321369 | + | 1572 | WP_188063725.1 | hypothetical protein | - |
| SPBM01_RS01710 () | 321456..321677 | - | 222 | WP_188063726.1 | hypothetical protein | - |
| SPBM01_RS01715 () | 321777..322184 | - | 408 | WP_188063727.1 | hypothetical protein | - |
| SPBM01_RS01720 () | 322184..322369 | - | 186 | WP_188063728.1 | hypothetical protein | - |
| SPBM01_RS01725 () | 322402..323931 | - | 1530 | WP_188063729.1 | collagen-like protein | - |
| SPBM01_RS01730 () | 323931..324287 | - | 357 | WP_188063730.1 | hypothetical protein | - |
| SPBM01_RS01735 () | 324347..328216 | - | 3870 | WP_188063731.1 | hypothetical protein | - |
| SPBM01_RS01740 () | 328431..328796 | - | 366 | WP_188063732.1 | hypothetical protein | - |
| SPBM01_RS01745 () | 328796..330856 | - | 2061 | WP_188063733.1 | hypothetical protein | - |
| SPBM01_RS01750 () | 330856..333627 | - | 2772 | WP_188063734.1 | hypothetical protein | - |
| SPBM01_RS01755 () | 333759..334502 | - | 744 | WP_188063735.1 | C40 family peptidase | - |
| SPBM01_RS01760 () | 334843..335352 | - | 510 | WP_188063736.1 | hypothetical protein | - |
| SPBM01_RS01765 () | 335352..335591 | - | 240 | WP_188063737.1 | hypothetical protein | - |
| SPBM01_RS01770 () | 335687..338785 | - | 3099 | WP_188065504.1 | tape measure protein | - |
| SPBM01_RS01775 () | 339274..339627 | - | 354 | WP_188063738.1 | hypothetical protein | - |
| SPBM01_RS01780 () | 339686..340138 | - | 453 | WP_188063739.1 | hypothetical protein | - |
| SPBM01_RS01785 () | 340192..340545 | - | 354 | WP_188063740.1 | hypothetical protein | - |
| SPBM01_RS01790 () | 340542..340883 | - | 342 | WP_188063741.1 | HK97 gp10 family phage protein | - |
| SPBM01_RS01795 () | 340873..341184 | - | 312 | WP_188063742.1 | hypothetical protein | - |
| SPBM01_RS01800 () | 341184..341585 | - | 402 | WP_188063743.1 | hypothetical protein | - |
| SPBM01_RS01805 () | 341657..342664 | - | 1008 | WP_188063744.1 | hypothetical protein | - |
| SPBM01_RS01810 () | 342824..343447 | - | 624 | WP_188063745.1 | hypothetical protein | - |
| SPBM01_RS01815 () | 343585..344184 | + | 600 | WP_188063746.1 | DUF4145 domain-containing protein | - |
| SPBM01_RS01820 () | 344114..345520 | - | 1407 | WP_188063747.1 | DUF4055 domain-containing protein | - |
| SPBM01_RS01825 () | 345574..346518 | - | 945 | WP_188063748.1 | DnaJ domain-containing protein | - |
| SPBM01_RS01830 () | 346567..347925 | - | 1359 | WP_188063749.1 | phage terminase large subunit | - |
| SPBM01_RS01835 () | 348332..348688 | - | 357 | WP_188063750.1 | helix-turn-helix domain-containing protein | - |
| SPBM01_RS01840 () | 349807..350358 | - | 552 | WP_188063751.1 | hypothetical protein | - |
| SPBM01_RS01845 () | 350549..350965 | - | 417 | WP_188063752.1 | hypothetical protein | - |
| SPBM01_RS01850 () | 350965..351489 | - | 525 | WP_188063753.1 | hypothetical protein | - |
| SPBM01_RS01855 () | 351486..351926 | - | 441 | WP_188063754.1 | hypothetical protein | - |
| SPBM01_RS01860 () | 352214..352423 | + | 210 | WP_188063755.1 | hypothetical protein | - |
| SPBM01_RS01865 () | 352470..352892 | - | 423 | WP_188063756.1 | hypothetical protein | - |
| SPBM01_RS01870 () | 352879..353358 | - | 480 | WP_188063757.1 | hypothetical protein | - |
| SPBM01_RS01875 () | 353492..354016 | + | 525 | WP_188063758.1 | hypothetical protein ; Integrase | Integrase |
| SPBM01_RS01880 () | 354103..354492 | + | 390 | WP_188063759.1 | hypothetical protein | - |
| SPBM01_RS01885 () | 354653..355006 | - | 354 | WP_188063760.1 | DUF2958 domain-containing protein | - |
| SPBM01_RS01890 () | 355175..355354 | + | 180 | WP_188063761.1 | hypothetical protein | - |
| SPBM01_RS01895 () | 355420..357045 | - | 1626 | WP_188063762.1 | IS607 family transposase ISNma20 | Transposase |
| SPBM01_RS01900 () | 357021..357602 | - | 582 | WP_188065505.1 | glycosyltransferase | - |
| SPBM01_RS01905 () | 357904..358083 | + | 180 | WP_188065889.1 | hypothetical protein | - |
| SPBM01_RS01910 () | 358115..358399 | - | 285 | WP_188065506.1 | low affinity iron permease family protein | - |
| SPBM01_RS01915 () | 358986..360179 | - | 1194 | WP_188063245.1 | IS91 family transposase ISMno24 | Transposase |
| SPBM01_RS01920 () | 360184..361089 | - | 906 | WP_088189994.1 | hypothetical protein | VF |
| SPBM01_RS01925 () | 361242..361466 | - | 225 | WP_188063763.1 | low affinity iron permease family protein | - |
| SPBM01_RS01930 () | 361531..361857 | + | 327 | WP_188063764.1 | hypothetical protein | - |
| SPBM01_RS01935 () | 362004..363203 | + | 1200 | WP_188063765.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| SPBM01_RS01940 () | 363301..364050 | + | 750 | WP_188062383.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| SPBM01_RS01945 () | 364047..364976 | + | 930 | WP_188063766.1 | FAD-binding protein | - |
| SPBM01_RS01950 () | 365044..365247 | - | 204 | WP_188063767.1 | hypothetical protein | - |
| SPBM01_RS01955 () | 365351..365551 | - | 201 | WP_188063768.1 | hypothetical protein | - |
| SPBM01_RS01960 () | 365631..365846 | - | 216 | WP_188063769.1 | cold-shock protein | - |
| SPBM01_RS01965 () | 366039..367091 | - | 1053 | WP_188063770.1 | hypothetical protein | - |
| SPBM01_RS01970 () | 367175..367375 | - | 201 | WP_188063771.1 | addiction module antitoxin | - |
| SPBM01_RS01975 () | 367422..367655 | + | 234 | WP_188063772.1 | DUF433 domain-containing protein | Antitoxin Detail |
| SPBM01_RS01980 () | 367652..367975 | + | 324 | WP_188063773.1 | DUF5615 family PIN-like protein | Toxin Detail |
| SPBM01_RS01985 () | 368056..368928 | + | 873 | WP_188063774.1 | FRG domain-containing protein | - |
| SPBM01_RS01990 () | 368934..371852 | - | 2919 | WP_188063775.1 | hypothetical protein | VF |
| SPBM01_RS01995 () | 371982..372131 | - | 150 | WP_188063776.1 | hypothetical protein | - |
| SPBM01_RS02000 () | 372650..372997 | + | 348 | WP_188063777.1 | UrcA family protein | - |
| SPBM01_RS02005 () | 373262..373591 | + | 330 | WP_188063778.1 | hypothetical protein | - |
| SPBM01_RS02010 () | 373628..374389 | - | 762 | WP_188063779.1 | hypothetical protein | VF |
| SPBM01_RS02015 () | 374383..375495 | - | 1113 | WP_188063780.1 | hypothetical protein | VF |
| SPBM01_RS02020 () | 375654..375845 | + | 192 | WP_188063781.1 | hypothetical protein | - |
| SPBM01_RS02025 () | 375940..376194 | + | 255 | WP_188063782.1 | hypothetical protein | - |
| SPBM01_RS02030 () | 376358..376906 | + | 549 | WP_188065507.1 | hypothetical protein | - |
| SPBM01_RS02035 () | 377287..377976 | - | 690 | WP_188063783.1 | 6-phosphogluconolactonase | - |
| SPBM01_RS02040 () | 377981..378457 | - | 477 | WP_188063784.1 | YbaK/EbsC family protein | - |
| SPBM01_RS02045 () | 378454..379458 | - | 1005 | WP_188063785.1 | hypothetical protein | VF |
| SPBM01_RS02050 () | 379585..381762 | - | 2178 | WP_188063786.1 | hypothetical protein | VF |
| SPBM01_RS02055 () | 381891..383099 | - | 1209 | WP_188063787.1 | acetyl-CoA C-acetyltransferase | - |
| SPBM01_RS02060 () | 383282..384943 | + | 1662 | WP_188063788.1 | MFS transporter | - |
| SPBM01_RS02065 () | 384950..385549 | - | 600 | WP_188063789.1 | nucleotidyltransferase family protein | - |
| SPBM01_RS02070 () | 385715..386320 | + | 606 | WP_188063790.1 | GTP cyclohydrolase I FolE | - |
| SPBM01_RS02075 () | 386317..387156 | + | 840 | WP_188063791.1 | SDR family oxidoreductase | - |
| SPBM01_RS02080 () | 387242..388018 | + | 777 | WP_188065508.1 | enoyl-CoA hydratase/isomerase family protein | - |
| SPBM01_RS02085 () | 388248..389471 | + | 1224 | WP_188063792.1 | hypothetical protein | VF |
| SPBM01_RS02090 () | 389527..390411 | - | 885 | WP_188063793.1 | 3-hydroxyisobutyrate dehydrogenase | - |
| SPBM01_RS02095 () | 390502..391581 | - | 1080 | WP_188063794.1 | enoyl-CoA hydratase/isomerase family protein | - |
| SPBM01_RS02100 () | 391689..392831 | - | 1143 | WP_188063795.1 | acyl-CoA dehydrogenase family protein | - |
| SPBM01_RS02105 () | 392960..393862 | + | 903 | WP_188065509.1 | LysR family transcriptional regulator | - |
| SPBM01_RS02110 () | 393901..394530 | + | 630 | WP_188063796.1 | methyltransferase domain-containing protein | - |
| SPBM01_RS02115 () | 394590..395522 | + | 933 | WP_188063797.1 | ABC transporter ATP-binding protein | - |
| SPBM01_RS02120 () | 395519..396289 | + | 771 | WP_188063798.1 | ABC transporter permease | - |
| SPBM01_RS02125 () | 396326..396646 | - | 321 | WP_188063799.1 | hypothetical protein | - |
| SPBM01_RS02130 () | 396721..398109 | - | 1389 | WP_188063800.1 | MATE family efflux transporter | - |
| SPBM01_RS02135 () | 398213..399142 | - | 930 | WP_188063801.1 | DUF808 domain-containing protein | - |
| SPBM01_RS02140 () | 399308..399541 | - | 234 | WP_188063802.1 | hypothetical protein | - |
| SPBM01_RS02145 () | 399538..399870 | - | 333 | WP_188065510.1 | hypothetical protein | - |
| SPBM01_RS02150 () | 399911..400969 | - | 1059 | WP_188063803.1 | PHB depolymerase family esterase | - |
| SPBM01_RS02155 () | 401329..401925 | - | 597 | WP_188063804.1 | 50S ribosomal protein L9 | - |
| SPBM01_RS02160 () | 401940..402164 | - | 225 | WP_167303342.1 | 30S ribosomal protein S18 | - |
| SPBM01_RS02165 () | 402179..402628 | - | 450 | WP_188063805.1 | 30S ribosomal protein S6 | - |
| SPBM01_RS02170 () | 402925..404325 | + | 1401 | WP_188063806.1 | GntP family permease | - |
| SPBM01_RS02175 () | 404333..404722 | - | 390 | WP_188065511.1 | BLUF domain-containing protein | - |
| SPBM01_RS02180 () | 404892..405278 | - | 387 | WP_188063807.1 | RcnB family protein | - |
| SPBM01_RS02185 () | 405769..405942 | - | 174 | WP_188063808.1 | hypothetical protein | - |
| SPBM01_RS02190 () | 406071..407276 | - | 1206 | WP_188063809.1 | ABC transporter permease | - |
| SPBM01_RS02195 () | 407344..408045 | - | 702 | WP_188063810.1 | hypothetical protein | VF |
| SPBM01_RS02200 () | 408051..409556 | - | 1506 | WP_188063811.1 | efflux RND transporter periplasmic adaptor subunit | - |
| SPBM01_RS02205 () | 409553..411010 | - | 1458 | WP_188063812.1 | efflux transporter outer membrane subunit | - |
| SPBM01_RS02210 () | 411192..412127 | + | 936 | WP_188063813.1 | ACP S-malonyltransferase | - |
| SPBM01_RS02215 () | 412170..412910 | + | 741 | WP_188063814.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|