MGE detailed information
MGE type: Prophage MGE length: 16487 bp
Accession: NZ_CP060295 Location: 4691146..4707632 Organism: Variovorax sp. PAMC26660 Replicon: chromosome
Accession: NZ_CP060295 Location: 4691146..4707632 Organism: Variovorax sp. PAMC26660 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7F35_RS21995 () | 4686486..4686995 | + | 510 | WP_187108705.1 | hypothetical protein | - |
| H7F35_RS22000 () | 4687007..4688086 | + | 1080 | WP_187108706.1 | PAS domain-containing sensor histidine kinase | - |
| H7F35_RS22005 () | 4688111..4689658 | + | 1548 | WP_187108707.1 | nitrogen regulation protein NR(I) | - |
| H7F35_RS22010 () | 4689681..4690232 | - | 552 | WP_187108708.1 | hypothetical protein | - |
| H7F35_RS22015 () | 4690237..4691022 | - | 786 | WP_187108709.1 | exodeoxyribonuclease III | - |
| H7F35_RS22020 () | 4691146..4691346 | - | 201 | WP_187108710.1 | helix-turn-helix domain-containing protein | - |
| H7F35_RS22025 () | 4691343..4691825 | - | 483 | WP_187114363.1 | methyltransferase domain-containing protein | - |
| H7F35_RS22030 () | 4691867..4692160 | - | 294 | WP_187108711.1 | hypothetical protein | - |
| H7F35_RS22035 () | 4692157..4693389 | - | 1233 | WP_187108712.1 | hypothetical protein | - |
| H7F35_RS22040 () | 4693398..4694030 | - | 633 | WP_187108713.1 | YqaJ viral recombinase family protein | - |
| H7F35_RS22045 () | 4694011..4694934 | - | 924 | WP_187114364.1 | recombinase RecT | - |
| H7F35_RS22050 () | 4695059..4695259 | - | 201 | WP_187108714.1 | hypothetical protein | - |
| H7F35_RS22055 () | 4695262..4695453 | - | 192 | WP_187108715.1 | hypothetical protein | - |
| H7F35_RS22060 () | 4695486..4695740 | + | 255 | WP_187108716.1 | recombination protein NinB | - |
| H7F35_RS22065 () | 4695737..4696207 | + | 471 | WP_187108717.1 | hypothetical protein | - |
| H7F35_RS22070 () | 4696201..4696593 | + | 393 | WP_187108718.1 | hypothetical protein | - |
| H7F35_RS22075 () | 4696590..4697162 | + | 573 | WP_187108719.1 | hypothetical protein | - |
| H7F35_RS22080 () | 4697285..4697461 | + | 177 | WP_187108720.1 | hypothetical protein | - |
| H7F35_RS22085 () | 4697499..4697786 | + | 288 | WP_187108721.1 | XRE family transcriptional regulator | - |
| H7F35_RS22090 () | 4698568..4699134 | + | 567 | WP_187108722.1 | terminase small subunit | - |
| H7F35_RS22095 () | 4699076..4700542 | + | 1467 | WP_187108723.1 | phage terminase large subunit | - |
| H7F35_RS22100 () | 4700546..4701253 | + | 708 | WP_187108724.1 | DUF1073 domain-containing protein | - |
| H7F35_RS22105 () | 4701704..4702015 | + | 312 | WP_187114365.1 | tail fiber assembly protein | - |
| H7F35_RS22110 () | 4702075..4702470 | + | 396 | WP_187108725.1 | hypothetical protein | - |
| H7F35_RS22115 () | 4702467..4702772 | + | 306 | WP_187108726.1 | hypothetical protein | - |
| H7F35_RS22120 () | 4702772..4703254 | + | 483 | WP_187108727.1 | glycoside hydrolase family 104 protein | - |
| H7F35_RS22125 () | 4703322..4703852 | + | 531 | WP_187108728.1 | DUF2514 family protein | - |
| H7F35_RS22130 () | 4703962..4705188 | + | 1227 | WP_187108729.1 | class I SAM-dependent methyltransferase | - |
| H7F35_RS22135 () | 4705209..4705631 | - | 423 | WP_187114366.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| H7F35_RS22140 () | 4705702..4705878 | - | 177 | WP_187108730.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| H7F35_RS22145 () | 4706013..4706357 | - | 345 | WP_187108731.1 | hypothetical protein | - |
| H7F35_RS22150 () | 4706361..4707632 | - | 1272 | WP_187108732.1 | hypothetical protein ; Integrase | Integrase |
| H7F35_RS22155 () | 4708020..4709027 | - | 1008 | WP_187108733.1 | hypothetical protein | - |
| H7F35_RS22160 () | 4709078..4709287 | - | 210 | WP_187108734.1 | hypothetical protein | - |
| H7F35_RS22165 () | 4709523..4712060 | + | 2538 | WP_187108735.1 | penicillin acylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|