MGE detailed information
MGE type: Genomic_island MGE length: 23829 bp
Accession: NZ_CP060289 Location: 2071221..2095049 Organism: Pseudomonas protegens strain H1F10A Replicon: chromosome
Accession: NZ_CP060289 Location: 2071221..2095049 Organism: Pseudomonas protegens strain H1F10A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GGD92_RS08995 () | 2066705..2067415 | + | 711 | WP_016962591.1 | ABC transporter permease | - |
| GGD92_RS09000 () | 2067462..2068703 | + | 1242 | WP_179597128.1 | FAD-binding oxidoreductase | - |
| GGD92_RS09005 () | 2068795..2069520 | + | 726 | WP_179601918.1 | amino acid ABC transporter ATP-binding protein | - |
| GGD92_RS09010 () | 2070475..2070874 | - | 400 | Protein_1796 | hypothetical protein | - |
| GGD92_RS09015 () | 2071221..2072525 | + | 1305 | WP_179597130.1 | SIR2 family protein | - |
| GGD92_RS09020 () | 2072522..2074243 | + | 1722 | WP_179597132.1 | ATP-binding protein | - |
| GGD92_RS09025 () | 2074657..2075103 | + | 447 | WP_179597134.1 | GNAT family N-acetyltransferase | - |
| GGD92_RS09030 () | 2075304..2076044 | - | 741 | WP_179597136.1 | potassium channel family protein | - |
| GGD92_RS09035 () | 2076799..2077107 | + | 309 | WP_179597138.1 | hypothetical protein | - |
| GGD92_RS09040 () | 2077562..2078815 | - | 1254 | WP_179601920.1 | MFS transporter | - |
| GGD92_RS09045 () | 2078862..2079887 | - | 1026 | WP_179597140.1 | methyltransferase | - |
| GGD92_RS09050 () | 2079906..2080691 | - | 786 | WP_179597141.1 | HAD-IIB family hydrolase | - |
| GGD92_RS09055 () | 2080698..2081321 | - | 624 | WP_179597142.1 | DUF1349 domain-containing protein | - |
| GGD92_RS09060 () | 2081314..2082159 | - | 846 | WP_123392730.1 | SDR family oxidoreductase | - |
| GGD92_RS09065 () | 2082256..2083968 | - | 1713 | WP_179601922.1 | hypothetical protein | - |
| GGD92_RS09070 () | 2084021..2085259 | - | 1239 | WP_179597144.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| GGD92_RS09075 () | 2085280..2085798 | - | 519 | WP_080966932.1 | sugar O-acetyltransferase | - |
| GGD92_RS09080 () | 2086334..2086908 | + | 575 | Protein_1810 | hypothetical protein | - |
| GGD92_RS09085 () | 2087062..2087580 | + | 519 | WP_179597146.1 | hypothetical protein | - |
| GGD92_RS09090 () | 2087666..2087872 | + | 207 | Protein_1812 | hypothetical protein | - |
| GGD92_RS09095 () | 2088465..2088647 | + | 183 | WP_041120604.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GGD92_RS09100 () | 2088683..2089084 | + | 402 | WP_179597148.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GGD92_RS09105 () | 2089242..2090645 | - | 1404 | WP_179597150.1 | PLP-dependent aminotransferase family protein | - |
| GGD92_RS09110 () | 2090733..2091179 | + | 447 | WP_179597152.1 | GNAT family N-acetyltransferase | - |
| GGD92_RS09115 () | 2091176..2091796 | + | 621 | WP_179597154.1 | NAD(P)H-dependent oxidoreductase | - |
| GGD92_RS09120 () | 2091824..2092255 | + | 432 | WP_179597156.1 | carboxymuconolactone decarboxylase family protein | - |
| GGD92_RS09125 () | 2092829..2092951 | - | 123 | Protein_1819 | PAAR domain-containing protein | - |
| GGD92_RS09130 () | 2093005..2093436 | - | 432 | WP_179597158.1 | hypothetical protein | - |
| GGD92_RS09135 () | 2093629..2094093 | - | 465 | WP_179597160.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| GGD92_RS09140 () | 2094190..2094558 | + | 369 | WP_102880282.1 | antibiotic biosynthesis monooxygenase | - |
| GGD92_RS09145 () | 2094591..2095049 | + | 459 | WP_179597162.1 | hypothetical protein | - |
| GGD92_RS09150 () | 2095951..2097576 | - | 1626 | WP_179597164.1 | methyl-accepting chemotaxis protein | - |
| GGD92_RS09155 () | 2098088..2098444 | + | 357 | WP_179597166.1 | hypothetical protein | - |
| GGD92_RS09160 () | 2098493..2098672 | + | 180 | WP_179597168.1 | hypothetical protein | - |
| GGD92_RS09165 () | 2098785..2099288 | + | 504 | WP_179597170.1 | zinc ribbon domain-containing protein | - |
| GGD92_RS09170 () | 2099327..2099683 | + | 357 | WP_179597172.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|