MGE detailed information
MGE type: Genomic_island MGE length: 11970 bp
Accession: NZ_CP060288 Location: 4645391..4657360 Organism: Pseudomonas mendocina strain CPS5 Replicon: chromosome
Accession: NZ_CP060288 Location: 4645391..4657360 Organism: Pseudomonas mendocina strain CPS5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7683_RS21685 (H7683_21665) | 4640993..4642183 | - | 1191 | WP_209449829.1 | zonular occludens toxin domain-containing protein | - |
| H7683_RS21690 (H7683_21670) | 4642183..4642500 | - | 318 | WP_209449830.1 | DUF2523 domain-containing protein | - |
| H7683_RS21695 (H7683_21675) | 4642502..4643473 | - | 972 | WP_244973845.1 | virulence factor TspB C-terminal domain-related protein | - |
| H7683_RS21700 (H7683_21680) | 4644034..4644240 | - | 207 | WP_209449832.1 | major capsid protein | - |
| H7683_RS21705 (H7683_21685) | 4644252..4644455 | - | 204 | WP_012018527.1 | hypothetical protein | - |
| H7683_RS21710 (H7683_21690) | 4644465..4644644 | - | 180 | WP_209449833.1 | hypothetical protein | - |
| H7683_RS21715 (H7683_21695) | 4644660..4645028 | - | 369 | WP_209449834.1 | hypothetical protein | - |
| H7683_RS21720 (H7683_21700) | 4645391..4645678 | - | 288 | WP_209451075.1 | hypothetical protein | - |
| H7683_RS24530 | 4645689..4645970 | - | 282 | WP_244973917.1 | DUF5447 family protein | - |
| H7683_RS21730 (H7683_21710) | 4646124..4646273 | - | 150 | WP_209449836.1 | hypothetical protein | - |
| H7683_RS21735 (H7683_21715) | 4646270..4646485 | - | 216 | WP_013715705.1 | hypothetical protein | - |
| H7683_RS21740 (H7683_21720) | 4646966..4648204 | + | 1239 | WP_209449837.1 | AAA family ATPase | - |
| H7683_RS21745 (H7683_21725) | 4648209..4648991 | + | 783 | WP_209449838.1 | hypothetical protein | - |
| H7683_RS21750 (H7683_21730) | 4649086..4649856 | + | 771 | WP_209449839.1 | hypothetical protein | - |
| H7683_RS21755 (H7683_21735) | 4649896..4650198 | - | 303 | WP_209449840.1 | hypothetical protein | - |
| H7683_RS21760 (H7683_21740) | 4650195..4650350 | - | 156 | WP_209449841.1 | hypothetical protein | - |
| H7683_RS21765 (H7683_21745) | 4650441..4650683 | + | 243 | WP_209449842.1 | hypothetical protein | - |
| H7683_RS21770 (H7683_21750) | 4650652..4650948 | + | 297 | WP_209449843.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| H7683_RS21775 (H7683_21755) | 4650951..4651352 | + | 402 | WP_183894914.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| H7683_RS24540 | 4651726..4651926 | + | 201 | WP_013715702.1 | hypothetical protein | - |
| H7683_RS21780 (H7683_21760) | 4652034..4653176 | + | 1143 | WP_209449844.1 | elongation factor P maturation arginine rhamnosyltransferase EarP | - |
| H7683_RS21785 (H7683_21765) | 4653211..4653783 | + | 573 | WP_003240094.1 | elongation factor P | - |
| H7683_RS21790 (H7683_21770) | 4653861..4654364 | + | 504 | WP_013715699.1 | RDD family protein | - |
| H7683_RS21795 (H7683_21775) | 4654371..4655321 | - | 951 | WP_209449845.1 | HTH-type transcriptional regulator DmlR | VF |
| H7683_RS21800 (H7683_21780) | 4655422..4656189 | + | 768 | WP_115291528.1 | sulfite exporter TauE/SafE family protein | - |
| H7683_RS21805 (H7683_21785) | 4656184..4657038 | - | 855 | WP_115291529.1 | HTH-type transcriptional regulator CynR | VF |
| H7683_RS21810 (H7683_21790) | 4657136..4657360 | + | 225 | WP_209449846.1 | DUF1127 domain-containing protein | - |
| H7683_RS21815 (H7683_21795) | 4657384..4658328 | + | 945 | WP_209449847.1 | DMT family transporter | - |
| H7683_RS21820 (H7683_21800) | 4658353..4658799 | + | 447 | WP_209449848.1 | DUF3291 domain-containing protein | - |
| H7683_RS21825 (H7683_21805) | 4658814..4660007 | + | 1194 | WP_013715692.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| H7683_RS21830 (H7683_21810) | 4660004..4660393 | - | 390 | WP_013715691.1 | lysozyme inhibitor LprI family protein | - |
| H7683_RS21835 (H7683_21815) | 4660645..4661400 | - | 756 | WP_209449849.1 | M48 family metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|