MGE detailed information
MGE type: Prophage MGE length: 9832 bp
Accession: NZ_CP060288 Location: 3018270..3028101 Organism: Pseudomonas mendocina strain CPS5 Replicon: chromosome
Accession: NZ_CP060288 Location: 3018270..3028101 Organism: Pseudomonas mendocina strain CPS5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7683_RS14015 (H7683_14010) | 3013718..3014650 | + | 933 | WP_115299095.1 | formate dehydrogenase accessory protein FdhE | - |
| H7683_RS14020 (H7683_14015) | 3014659..3016074 | + | 1416 | WP_183892481.1 | L-seryl-tRNA(Sec) selenium transferase | - |
| H7683_RS14025 (H7683_14020) | 3016071..3018017 | + | 1947 | WP_209449189.1 | selenocysteine-specific translation elongation factor | - |
| H7683_RS14035 (H7683_14030) | 3018270..3019301 | - | 1032 | WP_209449190.1 | IS91 family transposase ISCARN110 | Transposase |
| H7683_RS14040 (H7683_14035) | 3019301..3020578 | - | 1278 | WP_209449191.1 | hypothetical protein | - |
| H7683_RS14045 (H7683_14040) | 3020721..3021899 | - | 1179 | WP_209449192.1 | zonular occludens toxin domain-containing protein | - |
| H7683_RS14050 (H7683_14045) | 3021912..3022238 | - | 327 | WP_209449193.1 | DUF2523 domain-containing protein | - |
| H7683_RS24465 | 3022238..3023722 | - | 1485 | WP_244973820.1 | virulence factor TspB C-terminal domain-related protein | - |
| H7683_RS14060 (H7683_14055) | 3023870..3024076 | - | 207 | WP_041979008.1 | major capsid protein | - |
| H7683_RS14065 (H7683_14060) | 3024082..3024300 | - | 219 | WP_209449194.1 | hypothetical protein | - |
| H7683_RS14070 (H7683_14065) | 3024311..3024490 | - | 180 | WP_209449195.1 | hypothetical protein | - |
| H7683_RS14075 (H7683_14070) | 3024506..3024889 | - | 384 | WP_209449196.1 | hypothetical protein | - |
| H7683_RS14080 (H7683_14075) | 3025139..3025450 | - | 312 | WP_209449197.1 | hypothetical protein | - |
| H7683_RS14085 (H7683_14080) | 3025461..3025664 | - | 204 | WP_244973906.1 | DUF5447 family protein | - |
| H7683_RS14090 (H7683_14085) | 3025938..3026156 | - | 219 | WP_003245701.1 | hypothetical protein | - |
| H7683_RS14095 (H7683_14090) | 3026300..3026566 | + | 267 | WP_061237382.1 | hypothetical protein | - |
| H7683_RS14100 (H7683_14095) | 3026865..3027356 | + | 492 | WP_244973821.1 | Panacea domain-containing protein | Antitoxin Detail |
| H7683_RS14105 (H7683_14100) | 3027356..3027754 | + | 399 | WP_209449199.1 | hypothetical protein | Toxin Detail |
| H7683_RS14110 (H7683_14105) | 3027832..3028101 | - | 270 | WP_209449200.1 | hypothetical protein | - |
| H7683_RS14115 (H7683_14110) | 3028881..3029330 | - | 450 | WP_013713973.1 | DMT family transporter | - |
| H7683_RS14120 (H7683_14115) | 3029519..3030307 | - | 789 | WP_041976722.1 | aldolase/citrate lyase family protein | - |
| H7683_RS14125 (H7683_14120) | 3030318..3031121 | - | 804 | WP_041976724.1 | carbon-nitrogen hydrolase family protein | - |
| H7683_RS14130 (H7683_14125) | 3031206..3032204 | - | 999 | WP_013713976.1 | TRAP transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|