MGE detailed information
MGE type: Prophage MGE length: 19082 bp
Accession: NZ_CP060160 Location: 1005578..1024659 Organism: Staphylococcus lugdunensis strain MBAZ2 Replicon: chromosome
Accession: NZ_CP060160 Location: 1005578..1024659 Organism: Staphylococcus lugdunensis strain MBAZ2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H6Y62_RS04625 () | 1001279..1001995 | - | 717 | WP_002461418.1 | LytTR family DNA-binding domain-containing protein | - |
| H6Y62_RS04630 () | 1002008..1003297 | - | 1290 | WP_002461417.1 | GHKL domain-containing protein | - |
| H6Y62_RS04635 () | 1003318..1003461 | - | 144 | WP_002461416.1 | cyclic lactone autoinducer peptide | - |
| H6Y62_RS04640 () | 1003464..1004030 | - | 567 | WP_037540641.1 | accessory gene regulator AgrB | - |
| H6Y62_RS04645 () | 1004658..1005443 | - | 786 | WP_002492308.1 | carbon-nitrogen family hydrolase | - |
| H6Y62_RS04650 () | 1005578..1006201 | - | 624 | WP_002461413.1 | nitroreductase family protein | - |
| H6Y62_RS04655 () | 1006395..1007903 | + | 1509 | WP_062248909.1 | hypothetical protein | - |
| H6Y62_RS04660 () | 1008322..1009062 | - | 741 | WP_002461411.1 | CPBP family intramembrane metalloprotease | - |
| H6Y62_RS04665 () | 1009242..1009526 | + | 285 | WP_002461410.1 | co-chaperone GroES | - |
| H6Y62_RS04670 () | 1009586..1011208 | + | 1623 | WP_002461409.1 | 60 kDa chaperonin | VF |
| H6Y62_RS04675 () | 1011277..1012449 | - | 1173 | WP_002492309.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H6Y62_RS04680 () | 1012463..1013137 | - | 675 | WP_002445345.1 | helix-turn-helix transcriptional regulator | - |
| H6Y62_RS04685 () | 1013310..1013528 | + | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
| H6Y62_RS04690 () | 1013533..1013850 | + | 318 | WP_002445364.1 | helix-turn-helix domain-containing protein | - |
| H6Y62_RS04695 () | 1013847..1013993 | + | 147 | WP_002445365.1 | hypothetical protein | - |
| H6Y62_RS04700 () | 1013986..1014195 | + | 210 | WP_001058489.1 | hypothetical protein | Antitoxin Detail |
| H6Y62_RS04705 () | 1014198..1014521 | + | 324 | WP_002445368.1 | DUF1474 family protein | Toxin Detail |
| H6Y62_RS04710 () | 1014585..1015454 | + | 870 | WP_002445370.1 | primase alpha helix C-terminal domain-containing protein | - |
| H6Y62_RS04715 () | 1015468..1017177 | + | 1710 | WP_002445371.1 | DUF927 domain-containing protein | - |
| H6Y62_RS04720 () | 1017525..1017890 | + | 366 | WP_002445372.1 | hypothetical protein | - |
| H6Y62_RS04725 () | 1017904..1018545 | + | 642 | WP_002492310.1 | pathogenicity island protein | - |
| H6Y62_RS04730 () | 1018833..1019177 | + | 345 | WP_002445374.1 | hypothetical protein | - |
| H6Y62_RS04735 () | 1019191..1019424 | + | 234 | WP_002492317.1 | hypothetical protein | - |
| H6Y62_RS04740 () | 1019436..1019957 | + | 522 | WP_002445376.1 | hypothetical protein | - |
| H6Y62_RS04745 () | 1020020..1020592 | + | 573 | WP_002445377.1 | terminase small subunit | - |
| H6Y62_RS04750 () | 1020872..1021381 | + | 510 | WP_002492698.1 | DUF4065 domain-containing protein | - |
| H6Y62_RS04755 () | 1021374..1021982 | + | 609 | WP_002445379.1 | hypothetical protein | - |
| H6Y62_RS04760 () | 1022166..1022414 | + | 249 | WP_080047653.1 | DUF3102 domain-containing protein | - |
| H6Y62_RS04765 () | 1022857..1023771 | + | 915 | WP_002445383.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| H6Y62_RS04770 () | 1023829..1024659 | + | 831 | WP_002445384.1 | class I SAM-dependent methyltransferase | - |
| H6Y62_RS04775 () | 1025580..1026866 | - | 1287 | WP_002492717.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| H6Y62_RS04780 () | 1027340..1027519 | + | 180 | WP_002461405.1 | hypothetical protein | - |
| H6Y62_RS04785 () | 1027745..1028125 | + | 381 | WP_002492708.1 | GntR family transcriptional regulator | - |
| H6Y62_RS04790 () | 1028122..1029009 | + | 888 | WP_002492705.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|