MGE detailed information
MGE type: Prophage MGE length: 32639 bp
Accession: NZ_CP060159 Location: 435900..468538 Organism: Xylella fastidiosa subsp. fastidiosa strain GV230 Replicon: chromosome
Accession: NZ_CP060159 Location: 435900..468538 Organism: Xylella fastidiosa subsp. fastidiosa strain GV230 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFGV230_RS01725 () | 431369..432028 | - | 660 | WP_004089306.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| XFGV230_RS01730 () | 432141..434033 | - | 1893 | WP_038232799.1 | phosphogluconate dehydratase | - |
| XFGV230_RS01735 () | 434174..434893 | - | 720 | WP_011097597.1 | 6-phosphogluconolactonase | - |
| XFGV230_RS01740 () | 434890..435903 | - | 1014 | WP_004089300.1 | glucokinase | - |
| XFGV230_RS01745 () | 435900..437333 | - | 1434 | WP_004089298.1 | glucose-6-phosphate dehydrogenase | - |
| XFGV230_RS01750 () | 437662..438756 | + | 1095 | WP_011097599.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| XFGV230_RS01755 () | 438901..439704 | - | 804 | WP_004089294.1 | folate-binding protein YgfZ | - |
| XFGV230_RS01760 () | 440019..440237 | + | 219 | WP_011097601.1 | DUF1674 domain-containing protein | - |
| XFGV230_RS01765 () | 440295..440690 | + | 396 | WP_004089288.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| XFGV230_RS01770 () | 440687..441070 | + | 384 | WP_004089286.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| XFGV230_RS01775 () | 441078..442868 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| XFGV230_RS01780 () | 442889..443674 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| XFGV230_RS01785 () | 443795..444043 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| XFGV230_RS01790 () | 444066..444446 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| XFGV230_RS01795 () | 444472..445713 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| XFGV230_RS01800 () | 445706..446428 | + | 723 | WP_004089270.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| XFGV230_RS01805 () | 446776..449253 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| XFGV230_RS01810 () | 449238..449900 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| XFGV230_RS01815 () | 449905..450342 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| XFGV230_RS01820 () | 450360..452108 | + | 1749 | WP_004089264.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| XFGV230_RS01825 () | 452105..453124 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| XFGV230_RS01830 () | 453531..454250 | - | 720 | Protein_342 | phage late control D family protein | - |
| XFGV230_RS01835 () | 454150..455121 | - | 972 | WP_159241593.1 | hypothetical protein | - |
| XFGV230_RS01840 () | 455129..455686 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| XFGV230_RS01845 () | 455679..456572 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| XFGV230_RS01850 () | 456572..456910 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| XFGV230_RS01855 () | 457108..457389 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFGV230_RS01860 () | 457400..457675 | + | 276 | WP_004085172.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| XFGV230_RS01865 () | 457763..458065 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| XFGV230_RS01870 () | 458068..458469 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| XFGV230_RS01875 () | 458538..459125 | - | 588 | WP_004090703.1 | phage baseplate assembly protein V | - |
| XFGV230_RS01880 () | 459122..459664 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| XFGV230_RS01885 () | 459640..460161 | - | 522 | WP_057683415.1 | hypothetical protein | - |
| XFGV230_RS01890 () | 460158..460481 | - | 324 | WP_038233035.1 | hypothetical protein | - |
| XFGV230_RS01895 () | 460481..460741 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| XFGV230_RS01900 () | 460759..462633 | - | 1875 | WP_140161485.1 | phage major capsid protein | - |
| XFGV230_RS01905 () | 462617..463261 | - | 645 | WP_038232805.1 | phage portal protein | - |
| XFGV230_RS01910 () | 463225..463776 | + | 552 | WP_052076489.1 | hypothetical protein | - |
| XFGV230_RS01915 () | 463773..464051 | + | 279 | WP_011097620.1 | VRR-NUC domain-containing protein | - |
| XFGV230_RS01920 () | 464053..464361 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| XFGV230_RS01925 () | 464446..465864 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| XFGV230_RS01930 () | 465861..466115 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| XFGV230_RS01935 () | 466105..467124 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFGV230_RS01940 () | 467897..468538 | + | 642 | WP_011097625.1 | Iron-sulfur cluster carrier protein | VF |
| XFGV230_RS01945 () | 468566..469042 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| XFGV230_RS01950 () | 469047..469619 | + | 573 | WP_011097627.1 | YceI family protein | - |
| XFGV230_RS01955 () | 469616..471574 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| XFGV230_RS01960 () | 472507..472896 | - | 390 | WP_004089975.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|