MGE detailed information
MGE type: Prophage MGE length: 46187 bp
Accession: NZ_CP060159 Location: 1262711..1308897 Organism: Xylella fastidiosa subsp. fastidiosa strain GV230 Replicon: chromosome
Accession: NZ_CP060159 Location: 1262711..1308897 Organism: Xylella fastidiosa subsp. fastidiosa strain GV230 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFGV230_RS05505 () | 1258039..1258824 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| XFGV230_RS05510 () | 1258861..1261467 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| XFGV230_RS05515 () | 1261900..1262631 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| XFGV230_RS05520 () | 1262711..1263571 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| XFGV230_RS05525 () | 1263776..1264594 | + | 819 | WP_173391712.1 | hypothetical protein | - |
| XFGV230_RS05535 () | 1265367..1265711 | - | 345 | WP_004084923.1 | RidA family protein | - |
| XFGV230_RS05540 () | 1265914..1266246 | - | 333 | WP_004088648.1 | DNA-binding transcriptional regulator | - |
| XFGV230_RS05545 () | 1266438..1267520 | - | 1083 | WP_014607781.1 | phage late control D family protein | - |
| XFGV230_RS05550 () | 1267511..1267729 | - | 219 | WP_004088371.1 | tail protein X | - |
| XFGV230_RS05555 () | 1267726..1268208 | - | 483 | WP_011097928.1 | phage tail protein | - |
| XFGV230_RS05560 () | 1268205..1270424 | - | 2220 | WP_128723197.1 | phage tail tape measure protein | - |
| XFGV230_RS05565 () | 1270551..1270838 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| XFGV230_RS05570 () | 1270841..1271350 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| XFGV230_RS05575 () | 1271350..1272528 | - | 1179 | WP_128734780.1 | phage tail sheath family protein | - |
| XFGV230_RS05580 () | 1272593..1274185 | - | 1593 | WP_159241645.1 | hypothetical protein | - |
| XFGV230_RS05585 () | 1274193..1274750 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| XFGV230_RS05590 () | 1274743..1275636 | - | 894 | WP_160176385.1 | baseplate J/gp47 family protein | - |
| XFGV230_RS05595 () | 1275636..1275974 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| XFGV230_RS05600 () | 1276124..1276387 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| XFGV230_RS05605 () | 1276374..1276655 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| XFGV230_RS05610 () | 1276692..1277279 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| XFGV230_RS05615 () | 1277276..1277818 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| XFGV230_RS05620 () | 1277794..1278315 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| XFGV230_RS05625 () | 1278312..1278635 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| XFGV230_RS05630 () | 1278635..1278895 | - | 261 | WP_038232801.1 | hypothetical protein | - |
| XFGV230_RS05635 () | 1278913..1280787 | - | 1875 | WP_185864772.1 | phage major capsid protein | - |
| XFGV230_RS05640 () | 1280784..1282370 | - | 1587 | WP_185864773.1 | phage portal protein | - |
| XFGV230_RS05645 () | 1282367..1282918 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| XFGV230_RS05650 () | 1282922..1284874 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| XFGV230_RS05655 () | 1284867..1285442 | - | 576 | WP_011097938.1 | terminase small subunit | - |
| XFGV230_RS05660 () | 1285573..1285797 | - | 225 | WP_160176388.1 | hypothetical protein | - |
| XFGV230_RS05665 () | 1285799..1286260 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| XFGV230_RS05670 () | 1286250..1286579 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| XFGV230_RS05675 () | 1286572..1287066 | - | 495 | WP_011097941.1 | lysozyme | - |
| XFGV230_RS05680 () | 1287033..1287650 | - | 618 | WP_014607783.1 | hypothetical protein | - |
| XFGV230_RS05685 () | 1288422..1290959 | - | 2538 | WP_146462714.1 | DNA primase | - |
| XFGV230_RS05690 () | 1291095..1291688 | - | 594 | WP_140161265.1 | hypothetical protein | - |
| XFGV230_RS05695 () | 1291685..1292071 | - | 387 | WP_160176389.1 | phage antirepressor protein | - |
| XFGV230_RS05700 () | 1292068..1292352 | - | 285 | WP_140161266.1 | hypothetical protein | - |
| XFGV230_RS05705 () | 1292349..1292597 | - | 249 | WP_038230396.1 | hypothetical protein | - |
| XFGV230_RS05710 () | 1292594..1292782 | - | 189 | WP_004085135.1 | hypothetical protein | - |
| XFGV230_RS05715 () | 1292836..1293021 | - | 186 | Protein_1106 | hypothetical protein | - |
| XFGV230_RS05720 () | 1293464..1293724 | - | 261 | WP_012382631.1 | helix-turn-helix domain-containing protein | - |
| XFGV230_RS05725 () | 1293810..1294568 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| XFGV230_RS05730 () | 1294729..1295268 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| XFGV230_RS05735 () | 1295291..1295500 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| XFGV230_RS05740 () | 1295554..1295937 | + | 384 | WP_012382633.1 | hypothetical protein | - |
| XFGV230_RS05745 () | 1296167..1296700 | + | 534 | WP_040123105.1 | hypothetical protein | - |
| XFGV230_RS05750 () | 1296697..1297212 | + | 516 | WP_071869851.1 | hypothetical protein | - |
| XFGV230_RS05755 () | 1297209..1297673 | + | 465 | WP_145510566.1 | DUF1566 domain-containing protein | - |
| XFGV230_RS05760 () | 1297730..1298212 | - | 483 | WP_004088357.1 | hypothetical protein | - |
| XFGV230_RS05765 () | 1298512..1298703 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| XFGV230_RS05770 () | 1298727..1298918 | + | 192 | WP_128723218.1 | hypothetical protein | - |
| XFGV230_RS05775 () | 1298950..1299144 | + | 195 | WP_004086187.1 | hypothetical protein | - |
| XFGV230_RS05780 () | 1299134..1299631 | + | 498 | WP_185864774.1 | hypothetical protein | - |
| XFGV230_RS05785 () | 1299628..1300905 | + | 1278 | WP_014607792.1 | DUF2800 domain-containing protein | - |
| XFGV230_RS05790 () | 1300905..1301471 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| XFGV230_RS05795 () | 1301558..1303069 | + | 1512 | WP_185864775.1 | hypothetical protein | - |
| XFGV230_RS05800 () | 1303071..1305251 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| XFGV230_RS05805 () | 1305248..1305526 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| XFGV230_RS05810 () | 1305528..1305974 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| XFGV230_RS05815 () | 1306059..1307477 | + | 1419 | WP_038233072.1 | DEAD/DEAH box helicase | - |
| XFGV230_RS05820 () | 1307474..1307638 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| XFGV230_RS05825 () | 1307631..1307888 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| XFGV230_RS05830 () | 1307878..1308897 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFGV230_RS05835 () | 1309261..1311852 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|