MGE detailed information
MGE type: Genomic_island MGE length: 13397 bp
Accession: NZ_CP060117 Location: 1251852..1265248 Organism: Shigella sonnei strain UKMCC_1015 Replicon: chromosome
Accession: NZ_CP060117 Location: 1251852..1265248 Organism: Shigella sonnei strain UKMCC_1015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYI41_RS06000 (1246912) | 1246912..1251129 | + | 4218 | WP_140046287.1 | RHS element core protein | - |
| HYI41_RS06005 (1251141) | 1251141..1251590 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| HYI41_RS06010 (1251852) | 1251852..1252988 | + | 1137 | Protein_1158 | ISAs1 family transposase ISEc1 | Transposase |
| HYI41_RS06015 (1253026) | 1253026..1253436 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| HYI41_RS06020 (1253436) | 1253436..1253813 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| HYI41_RS06025 (1254282) | 1254282..1255418 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| HYI41_RS06030 (1255460) | 1255460..1256230 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| HYI41_RS06035 (1256411) | 1256411..1256857 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| HYI41_RS06040 (1256900) | 1256900..1259344 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| HYI41_RS06045 (1259584) | 1259584..1260162 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HYI41_RS06050 (1260368) | 1260368..1261135 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| HYI41_RS06055 (1261106) | 1261106..1261846 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| HYI41_RS06060 (1262002) | 1262002..1262280 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HYI41_RS06065 (1262283) | 1262283..1262543 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HYI41_RS06070 (1262729) | 1262729..1263502 | + | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| HYI41_RS06080 (1264552) | 1264552..1264680 | + | 129 | Protein_1172 | ISAs1 family transposase | - |
| HYI41_RS06085 (1264751) | 1264751..1265248 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| HYI41_RS06090 (1265371) | 1265371..1267083 | - | 1713 | Protein_1174 | flagellar biosynthesis protein FlhA | - |
| HYI41_RS06095 (1267055) | 1267055..1267840 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| HYI41_RS06100 (1267911) | 1267911..1268966 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HYI41_RS06105 (1268963) | 1268963..1269415 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| HYI41_RS06110 (1269661) | 1269661..1270182 | + | 522 | Protein_1178 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|