MGE detailed information
MGE type: Genomic_island MGE length: 53297 bp
Accession: NZ_CP060088 Location: 663452..716748 Organism: Vibrio parahaemolyticus strain TJA114 Replicon: chromosome
Accession: NZ_CP060088 Location: 663452..716748 Organism: Vibrio parahaemolyticus strain TJA114 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5404_RS11070 () | 658589..660136 | - | 1548 | WP_005464242.1 | alanine:cation symporter family protein | - |
| H5404_RS11075 () | 660441..661697 | - | 1257 | WP_025506662.1 | D-amino acid dehydrogenase | - |
| H5404_RS11080 () | 661805..662725 | + | 921 | WP_029835489.1 | LysR family transcriptional regulator | - |
| H5404_RS11085 () | 662878..663450 | + | 573 | WP_029784488.1 | hypothetical protein | - |
| H5404_RS11090 () | 663452..664594 | + | 1143 | WP_021823502.1 | lipase family protein | - |
| H5404_RS11095 () | 664749..666494 | - | 1746 | WP_140219244.1 | amidohydrolase | - |
| H5404_RS11100 () | 666784..668052 | + | 1269 | WP_005496305.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| H5404_RS11105 () | 668261..669592 | + | 1332 | WP_140219240.1 | aspartate aminotransferase family protein | - |
| H5404_RS11110 () | 669583..670422 | + | 840 | WP_140219238.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| H5404_RS11115 () | 670498..671865 | - | 1368 | WP_005464256.1 | Na+/H+ antiporter NhaC family protein | - |
| H5404_RS11120 () | 672032..672619 | - | 588 | WP_031822889.1 | DedA family protein | - |
| H5404_RS11125 () | 672842..674374 | - | 1533 | WP_005464264.1 | bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein | - |
| H5404_RS11130 () | 674510..675400 | - | 891 | WP_024699669.1 | LysR family transcriptional regulator | - |
| H5404_RS11135 () | 675799..676362 | + | 564 | WP_025522886.1 | porin family protein | - |
| H5404_RS11140 () | 676487..676665 | - | 179 | Protein_599 | lipase family protein | - |
| H5404_RS11145 () | 676738..677490 | - | 753 | Protein_600 | IS3 family transposase | - |
| H5404_RS11150 () | 677643..679139 | + | 1497 | WP_089204594.1 | ATP-binding protein | - |
| H5404_RS11155 () | 679136..681841 | + | 2706 | WP_089204576.1 | Z1 domain-containing protein | - |
| H5404_RS11160 () | 681834..682784 | + | 951 | WP_089204575.1 | PD-(D/E)XK motif protein | - |
| H5404_RS11165 () | 682787..684853 | + | 2067 | WP_153645109.1 | AIPR family protein | - |
| H5404_RS11170 () | 684986..686524 | + | 1539 | WP_089204573.1 | DNA cytosine methyltransferase | - |
| H5404_RS11175 () | 686730..687865 | - | 1136 | Protein_606 | tyrosine-type recombinase/integrase | - |
| H5404_RS11180 () | 688339..688821 | - | 483 | WP_029786578.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| H5404_RS11185 () | 688806..690167 | - | 1362 | WP_185215330.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| H5404_RS11190 () | 690647..691438 | - | 792 | WP_159408111.1 | metallophosphoesterase | - |
| H5404_RS11195 () | 691686..691976 | + | 291 | Protein_610 | hypothetical protein | - |
| H5404_RS11200 () | 692059..692445 | - | 387 | WP_159408110.1 | transcriptional regulator | - |
| H5404_RS11205 () | 693066..693980 | + | 915 | WP_159408108.1 | hypothetical protein | - |
| H5404_RS11210 () | 693970..694389 | + | 420 | WP_161613064.1 | hypothetical protein | - |
| H5404_RS11215 () | 694681..695388 | + | 708 | WP_159408106.1 | hypothetical protein | - |
| H5404_RS11220 () | 695920..696531 | - | 612 | WP_159408105.1 | hypothetical protein | - |
| H5404_RS11225 () | 696829..697335 | - | 507 | WP_159408104.1 | hypothetical protein | - |
| H5404_RS11230 () | 697910..699038 | - | 1129 | Protein_617 | MarR family transcriptional regulator | - |
| H5404_RS11235 () | 699139..699303 | + | 165 | WP_080728395.1 | AlpA family phage regulatory protein | - |
| H5404_RS11240 () | 699763..700578 | + | 816 | WP_159408103.1 | restriction endonuclease | - |
| H5404_RS11245 () | 700977..701777 | + | 801 | WP_197972204.1 | abortive infection family protein | - |
| H5404_RS11250 () | 701944..702738 | + | 795 | WP_159408102.1 | hypothetical protein | - |
| H5404_RS11255 () | 703217..703429 | + | 213 | WP_005380667.1 | cold-shock protein | - |
| H5404_RS11260 () | 703549..703749 | + | 201 | WP_020196715.1 | hypothetical protein | - |
| H5404_RS11265 () | 703815..703973 | + | 159 | WP_185215332.1 | hypothetical protein | - |
| H5404_RS11270 () | 704772..704927 | - | 156 | WP_020196713.1 | hypothetical protein | - |
| H5404_RS11275 () | 705130..705339 | - | 210 | WP_005380677.1 | cold-shock protein | - |
| H5404_RS11280 () | 705956..708766 | + | 2811 | WP_185215334.1 | ATPase | - |
| H5404_RS11285 () | 708850..709806 | + | 957 | WP_185215336.1 | hypothetical protein | - |
| H5404_RS11290 () | 710001..710540 | - | 540 | WP_159408101.1 | hypothetical protein | - |
| H5404_RS11295 () | 710929..711216 | + | 288 | WP_185215338.1 | hypothetical protein | - |
| H5404_RS11300 () | 711861..712451 | + | 591 | WP_159408099.1 | recombinase family protein | - |
| H5404_RS11305 () | 713678..714880 | - | 1203 | WP_140382950.1 | type II restriction endonuclease | - |
| H5404_RS11310 () | 715036..716748 | + | 1713 | WP_185215339.1 | DNA (cytosine-5-)-methyltransferase | - |
| H5404_RS11315 () | 716802..719219 | - | 2418 | WP_185215341.1 | hypothetical protein | - |
| H5404_RS11320 () | 719357..719635 | - | 279 | WP_000115789.1 | AlpA family phage regulatory protein | - |
| H5404_RS11325 () | 720033..721259 | - | 1227 | WP_159408096.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|