MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 117766 bp
Accession: NZ_CP060086 Location: 5424238..5542003 Organism: Pseudomonas aeruginosa strain JNQH-PA57 Replicon: chromosome
Accession: NZ_CP060086 Location: 5424238..5542003 Organism: Pseudomonas aeruginosa strain JNQH-PA57 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5409_RS25035 () | 5419808..5424007 | + | 4200 | WP_121382108.1 | two-partner secretion system exoprotein TpsA4 | - |
| H5409_RS25040 () | 5424375..5425235 | + | 861 | WP_023094840.1 | ParA family protein | - |
| H5409_RS25045 () | 5425237..5425974 | + | 738 | WP_003134063.1 | hypothetical protein | - |
| H5409_RS25050 () | 5425971..5426468 | + | 498 | WP_003134065.1 | hypothetical protein | - |
| H5409_RS25055 () | 5426474..5427295 | + | 822 | WP_162836285.1 | hypothetical protein | - |
| H5409_RS25060 () | 5427292..5427978 | + | 687 | WP_003134069.1 | hypothetical protein | - |
| H5409_RS25065 () | 5427978..5428679 | + | 702 | WP_003134071.1 | DUF2786 domain-containing protein | - |
| H5409_RS25070 () | 5428676..5429383 | + | 708 | WP_003134072.1 | HNH endonuclease | - |
| H5409_RS25075 () | 5429367..5429591 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| H5409_RS25080 () | 5429588..5430934 | + | 1347 | WP_003134077.1 | replicative DNA helicase | - |
| H5409_RS25085 () | 5430931..5431116 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| H5409_RS25090 () | 5431106..5431633 | + | 528 | WP_003134079.1 | hypothetical protein | - |
| H5409_RS25095 () | 5431630..5431887 | + | 258 | WP_003134081.1 | hypothetical protein | - |
| H5409_RS25100 () | 5431880..5432374 | + | 495 | WP_003134082.1 | hypothetical protein | - |
| H5409_RS25105 () | 5432367..5432600 | + | 234 | WP_003134084.1 | hypothetical protein | - |
| H5409_RS25110 () | 5432600..5433616 | + | 1017 | WP_023103382.1 | nucleoid-associated protein YejK | - |
| H5409_RS25115 () | 5433619..5433867 | + | 249 | WP_016254076.1 | Arc family DNA-binding protein | - |
| H5409_RS25120 () | 5433864..5435600 | + | 1737 | WP_031690666.1 | ParB family protein | - |
| H5409_RS25125 () | 5435628..5436395 | + | 768 | WP_003134101.1 | DUF2857 domain-containing protein | - |
| H5409_RS25130 () | 5436392..5437717 | + | 1326 | WP_003134103.1 | hypothetical protein | - |
| H5409_RS25135 () | 5437829..5438242 | - | 414 | WP_153570846.1 | hypothetical protein | - |
| H5409_RS25140 () | 5438253..5438393 | + | 141 | WP_153549538.1 | hypothetical protein | - |
| H5409_RS25145 () | 5438550..5439278 | + | 729 | WP_023094843.1 | TIGR03761 family integrating conjugative element protein | - |
| H5409_RS25150 () | 5439284..5439817 | + | 534 | WP_003134105.1 | DUF3158 family protein | - |
| H5409_RS25155 () | 5439831..5440319 | + | 489 | WP_003134107.1 | single-stranded DNA-binding protein | - |
| H5409_RS25160 () | 5440423..5440617 | + | 195 | WP_031632157.1 | hypothetical protein | - |
| H5409_RS25165 () | 5440869..5441036 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| H5409_RS25170 () | 5441337..5441531 | - | 195 | WP_023094845.1 | hypothetical protein | - |
| H5409_RS25175 () | 5441547..5441957 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| H5409_RS25180 () | 5441957..5442199 | - | 243 | WP_170869361.1 | antitoxin | Antitoxin Detail |
| H5409_RS25185 () | 5442505..5444424 | + | 1920 | WP_003134111.1 | type I DNA topoisomerase | - |
| H5409_RS25190 () | 5444432..5445184 | + | 753 | Protein_4982 | hypothetical protein | - |
| H5409_RS25195 () | 5445301..5445906 | - | 606 | WP_023094848.1 | LysE family translocator | - |
| H5409_RS25200 () | 5446028..5446897 | + | 870 | WP_023094849.1 | HTH-type transcriptional regulator ArgP | VF |
| H5409_RS25205 () | 5447341..5449230 | + | 1890 | WP_003134117.1 | hypothetical protein | - |
| H5409_RS25210 () | 5449227..5451200 | + | 1974 | WP_003134119.1 | DEAD/DEAH box helicase | - |
| H5409_RS25215 () | 5451288..5452400 | + | 1113 | WP_023094851.1 | hypothetical protein | VF |
| H5409_RS25220 () | 5452400..5454109 | + | 1710 | WP_003134120.1 | hypothetical protein | VF |
| H5409_RS25225 () | 5454113..5455438 | + | 1326 | WP_003134121.1 | type 4b pilus protein PilO2 | - |
| H5409_RS25230 () | 5455428..5455961 | + | 534 | WP_003134123.1 | type IV pilus biogenesis protein PilP | - |
| H5409_RS25235 () | 5455970..5457550 | + | 1581 | WP_003134124.1 | hypothetical protein | VF |
| H5409_RS25240 () | 5457550..5458629 | + | 1080 | WP_003109360.1 | hypothetical protein | VF |
| H5409_RS25245 () | 5458651..5459181 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| H5409_RS25250 () | 5459178..5460119 | + | 942 | WP_003134125.1 | Flp pilus assembly complex ATPase component TadA | - |
| H5409_RS25255 () | 5460124..5461452 | + | 1329 | WP_003134127.1 | hypothetical protein | VF |
| H5409_RS25260 () | 5461481..5461918 | + | 438 | WP_003134129.1 | hypothetical protein | VF |
| H5409_RS25265 () | 5462725..5463564 | - | 840 | WP_023094852.1 | hypothetical protein | - |
| H5409_RS25270 () | 5463691..5464869 | + | 1179 | WP_023094853.1 | hypothetical protein | - |
| H5409_RS25275 () | 5464866..5467130 | + | 2265 | WP_003134145.1 | Mov34/MPN/PAD-1 family protein | - |
| H5409_RS25280 () | 5467216..5468301 | + | 1086 | WP_023094854.1 | MBL fold metallo-hydrolase | - |
| H5409_RS25285 () | 5468298..5469125 | + | 828 | WP_023094855.1 | hypothetical protein | - |
| H5409_RS25290 () | 5469519..5469908 | + | 390 | WP_016264238.1 | hypothetical protein | - |
| H5409_RS25295 () | 5469981..5470160 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| H5409_RS25300 () | 5470620..5471108 | + | 489 | WP_023094856.1 | DUF3577 domain-containing protein | - |
| H5409_RS25305 () | 5471246..5471404 | + | 159 | WP_003134147.1 | hypothetical protein | - |
| H5409_RS25310 () | 5471478..5471675 | + | 198 | WP_023094857.1 | hypothetical protein | - |
| H5409_RS25315 () | 5472160..5472867 | + | 708 | WP_003134149.1 | hypothetical protein | - |
| H5409_RS25320 () | 5473103..5473453 | + | 351 | WP_003134150.1 | hypothetical protein | - |
| H5409_RS25325 () | 5473510..5474142 | + | 633 | WP_003134151.1 | DUF3275 family protein | - |
| H5409_RS25330 () | 5474139..5474414 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| H5409_RS25335 () | 5474484..5474846 | + | 363 | WP_003134152.1 | hypothetical protein | - |
| H5409_RS25340 () | 5474914..5475168 | + | 255 | WP_003134153.1 | hypothetical protein | - |
| H5409_RS25345 () | 5475260..5475865 | + | 606 | WP_003134154.1 | hypothetical protein | - |
| H5409_RS25350 () | 5475895..5477340 | + | 1446 | WP_003134155.1 | class I SAM-dependent methyltransferase | - |
| H5409_RS25355 () | 5477445..5479694 | + | 2250 | WP_003134156.1 | DEAD/DEAH box helicase | - |
| H5409_RS25360 () | 5479803..5480139 | - | 337 | Protein_5016 | VOC family protein | - |
| H5409_RS25365 () | 5480513..5481769 | - | 1257 | WP_078463407.1 | helix-turn-helix domain-containing protein | - |
| H5409_RS25370 () | 5482004..5482273 | + | 270 | WP_023094860.1 | hypothetical protein | - |
| H5409_RS25375 () | 5482286..5483365 | + | 1080 | WP_023094861.1 | p-hydroxybenzoic acid efflux pump subunit AaeA | VF |
| H5409_RS25380 () | 5483349..5485385 | + | 2037 | WP_003086207.1 | FUSC family protein | - |
| H5409_RS25385 () | 5485750..5486477 | + | 728 | Protein_5021 | hypothetical protein | VF |
| H5409_RS25390 () | 5486536..5487049 | + | 514 | Protein_5022 | NAD(P)-binding protein | - |
| H5409_RS25395 () | 5487417..5488307 | - | 891 | WP_003086197.1 | LysR family transcriptional regulator | - |
| H5409_RS25400 () | 5488705..5490225 | - | 1521 | WP_031690674.1 | MFS transporter | - |
| H5409_RS25405 () | 5490241..5491449 | - | 1209 | WP_023094862.1 | p-hydroxybenzoic acid efflux pump subunit AaeA | VF |
| H5409_RS25410 () | 5491439..5492896 | - | 1458 | WP_003134162.1 | efflux transporter outer membrane subunit | - |
| H5409_RS25415 () | 5493087..5493671 | - | 585 | WP_031632454.1 | isochorismatase family protein | - |
| H5409_RS25420 () | 5493773..5494507 | - | 735 | WP_071535248.1 | pirin family protein | - |
| H5409_RS25425 () | 5494881..5495492 | - | 612 | WP_023094864.1 | glutathione S-transferase family protein | - |
| H5409_RS25430 () | 5495523..5496380 | + | 858 | WP_003086189.1 | alpha/beta hydrolase | - |
| H5409_RS25435 () | 5496763..5498211 | - | 1449 | WP_003134163.1 | hypothetical protein | VF |
| H5409_RS25440 () | 5498612..5499295 | + | 684 | Protein_5032 | IS5 family transposase ISPa16 | Transposase |
| H5409_RS25445 () | 5499302..5499664 | + | 363 | Protein_5033 | IS5 family transposase ISPa16 | Transposase |
| H5409_RS25450 () | 5499793..5500473 | + | 681 | WP_003134165.1 | hypothetical protein | - |
| H5409_RS25455 () | 5500484..5501239 | + | 756 | WP_003134166.1 | TIGR03759 family integrating conjugative element protein | - |
| H5409_RS25460 () | 5501224..5501805 | + | 582 | WP_003134167.1 | hypothetical protein | VF |
| H5409_RS25465 () | 5501802..5502302 | + | 501 | WP_003134168.1 | integrating conjugative element protein | - |
| H5409_RS25470 () | 5502311..5502580 | + | 270 | WP_003134169.1 | hypothetical protein | - |
| H5409_RS25475 () | 5502585..5504816 | + | 2232 | WP_003134171.1 | type IV conjugative transfer system coupling protein TraD | - |
| H5409_RS25480 () | 5504816..5505562 | + | 747 | WP_003134173.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| H5409_RS25485 () | 5505573..5507054 | + | 1482 | WP_003134175.1 | UvrD-helicase domain-containing protein | - |
| H5409_RS25490 () | 5507185..5508294 | + | 1110 | WP_003134177.1 | hypothetical protein | - |
| H5409_RS25495 () | 5508338..5508649 | - | 312 | WP_003134179.1 | DUF2845 domain-containing protein | - |
| H5409_RS25500 () | 5508822..5509121 | + | 300 | WP_003086170.1 | hypothetical protein | - |
| H5409_RS25505 () | 5509215..5509553 | + | 339 | WP_023094867.1 | RAQPRD family integrative conjugative element protein | - |
| H5409_RS25510 () | 5509550..5509789 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| H5409_RS25515 () | 5509807..5510163 | + | 357 | WP_023094868.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| H5409_RS25520 () | 5510174..5510560 | + | 387 | WP_003134190.1 | TIGR03750 family conjugal transfer protein | - |
| H5409_RS25525 () | 5510557..5511216 | + | 660 | WP_003086164.1 | TIGR03746 family integrating conjugative element protein | - |
| H5409_RS25530 () | 5511213..5512097 | + | 885 | WP_003134192.1 | TIGR03749 family integrating conjugative element protein | - |
| H5409_RS25535 () | 5512081..5513586 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| H5409_RS25540 () | 5513564..5514007 | + | 444 | WP_003134194.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| H5409_RS25545 () | 5514007..5516949 | + | 2943 | WP_023094870.1 | conjugative transfer ATPase | - |
| H5409_RS25550 () | 5516946..5517230 | + | 285 | WP_003134196.1 | hypothetical protein | - |
| H5409_RS25555 () | 5517227..5517886 | + | 660 | WP_023094871.1 | DsbA family protein | - |
| H5409_RS25560 () | 5517883..5518101 | - | 219 | WP_004347910.1 | hypothetical protein | - |
| H5409_RS25565 () | 5518501..5519059 | + | 559 | Protein_5057 | recombinase family protein | - |
| H5409_RS25570 () | 5519114..5519788 | - | 675 | WP_044286351.1 | hypothetical protein | - |
| H5409_RS25575 () | 5519871..5520536 | - | 666 | WP_052155769.1 | DUF3218 family protein | - |
| H5409_RS25580 () | 5520550..5521578 | - | 1029 | WP_071557977.1 | hypothetical protein | - |
| H5409_RS25585 () | 5521812..5524778 | + | 2967 | WP_003134201.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H5409_RS25590 () | 5526687..5527118 | + | 432 | WP_003134206.1 | TIGR03757 family integrating conjugative element protein | - |
| H5409_RS25595 () | 5527118..5528056 | + | 939 | WP_003086152.1 | TIGR03756 family integrating conjugative element protein | - |
| H5409_RS25600 () | 5528074..5529456 | + | 1383 | WP_003134207.1 | integrating conjugative element protein | - |
| H5409_RS25605 () | 5529456..5529803 | + | 348 | WP_003134208.1 | hypothetical protein | - |
| H5409_RS25610 () | 5529800..5531344 | + | 1545 | WP_003134209.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| H5409_RS25615 () | 5531379..5531729 | - | 351 | WP_023094875.1 | DUF3742 family protein | - |
| H5409_RS25620 () | 5531848..5532120 | + | 273 | WP_003125101.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| H5409_RS25625 () | 5532124..5532474 | + | 351 | WP_003134211.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H5409_RS25630 () | 5532926..5538001 | + | 5076 | WP_058343478.1 | ATP-binding protein | - |
| H5409_RS25635 () | 5538390..5540309 | + | 1920 | WP_023094881.1 | helicase/relaxase domain-containing protein | - |
| H5409_RS25640 () | 5540306..5541589 | + | 1284 | WP_003134216.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H5409_RS25660 () | 5542441..5545005 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| H5409_RS25665 () | 5545161..5545889 | - | 729 | WP_121382203.1 | peptidoglycan editing factor PgeF | - |
| H5409_RS25670 () | 5545886..5546848 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|