MGE detailed information
MGE type: Prophage MGE length: 76298 bp
Accession: NZ_CP060083 Location: 4035992..4112289 Organism: Escherichia coli strain G1/2 Replicon: chromosome
Accession: NZ_CP060083 Location: 4035992..4112289 Organism: Escherichia coli strain G1/2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4P46_RS19850 () | 4031300..4031710 | + | 411 | WP_032230816.1 | hypothetical protein | - |
| H4P46_RS19855 () | 4032121..4032330 | + | 210 | Protein_3885 | transposase | - |
| H4P46_RS19860 () | 4032372..4033115 | - | 744 | WP_001556423.1 | AraC family transcriptional regulator | - |
| H4P46_RS19865 () | 4033779..4034762 | + | 984 | Protein_3887 | transposase | - |
| H4P46_RS19870 () | 4035161..4035934 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| H4P46_RS19875 () | 4035992..4036546 | - | 555 | WP_000904981.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| H4P46_RS19880 () | 4036576..4037307 | + | 732 | WP_047660167.1 | hypothetical protein | - |
| H4P46_RS19885 () | 4037307..4037570 | + | 264 | WP_000064419.1 | hypothetical protein | - |
| H4P46_RS19890 () | 4037542..4037961 | - | 420 | WP_000782981.1 | tail assembly chaperone | - |
| H4P46_RS19895 () | 4037958..4038620 | - | 663 | WP_047660169.1 | hypothetical protein | - |
| H4P46_RS19900 () | 4038624..4039208 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| H4P46_RS19905 () | 4039199..4040257 | - | 1059 | WP_000785311.1 | baseplate J/gp47 family protein | - |
| H4P46_RS19910 () | 4040244..4040669 | - | 426 | WP_000424744.1 | phage GP46 family protein | - |
| H4P46_RS19915 () | 4040669..4041217 | - | 549 | WP_001259079.1 | phage baseplate assembly protein V | - |
| H4P46_RS19920 () | 4041217..4042296 | - | 1080 | WP_047645111.1 | baseplate protein | - |
| H4P46_RS19925 () | 4042293..4043669 | - | 1377 | WP_001360104.1 | DNA circularization N-terminal domain-containing protein | - |
| H4P46_RS19930 () | 4043694..4045601 | - | 1908 | WP_000774664.1 | phage tail tape measure protein | - |
| H4P46_RS19935 () | 4045686..4046009 | - | 324 | WP_000571713.1 | phage tail assembly protein | - |
| H4P46_RS19940 () | 4046006..4046362 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| H4P46_RS19945 () | 4046362..4047858 | - | 1497 | WP_047645113.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| H4P46_RS19950 () | 4047842..4048012 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| H4P46_RS19955 () | 4048021..4048581 | - | 561 | WP_000779289.1 | hypothetical protein | - |
| H4P46_RS19960 () | 4048578..4049084 | - | 507 | WP_000224834.1 | hypothetical protein | - |
| H4P46_RS19965 () | 4049059..4049469 | - | 411 | WP_000702389.1 | phage head closure protein | - |
| H4P46_RS19970 () | 4049466..4049789 | - | 324 | WP_000927715.1 | head-tail connector protein | - |
| H4P46_RS19975 () | 4049792..4049992 | - | 201 | WP_000601363.1 | hypothetical protein | - |
| H4P46_RS19980 () | 4050042..4051247 | - | 1206 | WP_000257507.1 | phage major capsid protein | - |
| H4P46_RS19985 () | 4051262..4051912 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| H4P46_RS19990 () | 4051890..4053131 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| H4P46_RS19995 () | 4053131..4053313 | - | 183 | WP_000605605.1 | hypothetical protein | - |
| H4P46_RS20000 () | 4053325..4054821 | - | 1497 | WP_122987458.1 | terminase large subunit | - |
| H4P46_RS20005 () | 4055055..4055549 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| H4P46_RS20010 () | 4055675..4056025 | - | 351 | WP_047645117.1 | HNH endonuclease | - |
| H4P46_RS20015 () | 4056551..4056844 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| H4P46_RS20020 () | 4056935..4057117 | - | 183 | WP_077628513.1 | prophage lysis lipoprotein RzoD | - |
| H4P46_RS20025 () | 4057334..4057831 | - | 498 | WP_001135274.1 | lysozyme RrrD | - |
| H4P46_RS20030 () | 4057831..4058046 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| H4P46_RS20035 () | 4058635..4059717 | + | 1083 | WP_000737272.1 | porin OmpD | - |
| H4P46_RS20040 () | 4059906..4060289 | - | 384 | WP_001204791.1 | antitermination protein QuuD | - |
| H4P46_RS20045 () | 4060375..4060515 | - | 141 | WP_000971055.1 | YlcG family protein | - |
| H4P46_RS20050 () | 4060512..4060874 | - | 363 | WP_021499738.1 | crossover junction endodeoxyribonuclease RusA | - |
| H4P46_RS20055 () | 4060871..4061161 | - | 291 | WP_000774486.1 | DUF1364 domain-containing protein | - |
| H4P46_RS20060 () | 4061154..4061324 | - | 171 | WP_000224914.1 | hypothetical protein | - |
| H4P46_RS20065 () | 4061324..4061779 | - | 456 | WP_047645124.1 | DNA base-flipping protein YbcN | - |
| H4P46_RS20070 () | 4061776..4061877 | - | 102 | WP_072097297.1 | hypothetical protein | - |
| H4P46_RS20075 () | 4061967..4062476 | - | 510 | WP_000017329.1 | hypothetical protein | - |
| H4P46_RS20080 () | 4062772..4063578 | - | 807 | WP_050487536.1 | hypothetical protein | - |
| H4P46_RS20085 () | 4063782..4063988 | - | 207 | Protein_3931 | ead/Ea22-like family protein | - |
| H4P46_RS20090 () | 4063985..4064195 | - | 211 | Protein_3932 | hypothetical protein | - |
| H4P46_RS20095 () | 4064213..4064413 | - | 201 | WP_000062289.1 | hypothetical protein | - |
| H4P46_RS20100 () | 4064410..4064703 | - | 294 | WP_032262210.1 | protein ren | - |
| H4P46_RS20105 () | 4064700..4065401 | - | 702 | WP_000788813.1 | hypothetical protein | - |
| H4P46_RS20110 () | 4065398..4066417 | - | 1020 | WP_000147893.1 | replication protein | - |
| H4P46_RS20115 () | 4066414..4066953 | - | 540 | WP_001182903.1 | toxin YdaT domain-containing protein | - |
| H4P46_RS20120 () | 4067023..4067253 | - | 231 | WP_001067458.1 | helix-turn-helix domain-containing protein | - |
| H4P46_RS20125 () | 4067358..4068047 | + | 690 | WP_000858975.1 | helix-turn-helix transcriptional regulator | - |
| H4P46_RS20130 () | 4068643..4068849 | + | 207 | WP_023307711.1 | hypothetical protein | - |
| H4P46_RS20135 () | 4068925..4069221 | + | 297 | WP_047645127.1 | host-nuclease inhibitor protein Gam | - |
| H4P46_RS20140 () | 4069227..4070012 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| H4P46_RS20145 () | 4070009..4070689 | + | 681 | WP_001502210.1 | YqaJ viral recombinase family protein | - |
| H4P46_RS20150 () | 4070686..4070868 | + | 183 | WP_074545851.1 | DUF1317 domain-containing protein | - |
| H4P46_RS20155 () | 4070841..4071032 | + | 192 | WP_000548531.1 | DUF1382 family protein | - |
| H4P46_RS20160 () | 4071109..4071324 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| H4P46_RS20165 () | 4071423..4071641 | + | 219 | WP_047645103.1 | TraR/DksA family transcriptional regulator | - |
| H4P46_RS20170 () | 4071689..4071967 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| H4P46_RS20175 () | 4072166..4073329 | + | 1164 | WP_000051888.1 | hypothetical protein ; Integrase | Integrase |
| H4P46_RS20185 () | 4073534..4074787 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H4P46_RS20190 () | 4074799..4075902 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H4P46_RS20195 () | 4076190..4077245 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| H4P46_RS20200 () | 4077284..4077685 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| H4P46_RS20205 () | 4077743..4078987 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 4078403..4078483 | - | 81 | NuclAT_12 | - | - |
| - () | 4078403..4078483 | - | 81 | NuclAT_12 | - | - |
| - () | 4078403..4078483 | - | 81 | NuclAT_12 | - | - |
| - () | 4078403..4078483 | - | 81 | NuclAT_12 | - | - |
| H4P46_RS20210 () | 4079079..4079537 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| H4P46_RS20215 () | 4079798..4081255 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| H4P46_RS20220 () | 4081312..4081833 | - | 522 | Protein_3957 | peptide chain release factor H | - |
| H4P46_RS20225 () | 4081829..4082035 | - | 207 | Protein_3958 | RtcB family protein | - |
| H4P46_RS20230 () | 4082353..4082805 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| H4P46_RS20235 () | 4082815..4083213 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H4P46_RS20240 () | 4083216..4083509 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H4P46_RS20245 () | 4083561..4084616 | - | 1056 | WP_047665292.1 | DNA polymerase IV | - |
| H4P46_RS20250 () | 4084687..4085472 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| H4P46_RS20255 () | 4085417..4087156 | + | 1740 | WP_001334802.1 | hypothetical protein | VF |
| H4P46_RS20260 () | 4087380..4087877 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| H4P46_RS20265 () | 4088053..4088802 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| H4P46_RS20270 () | 4089012..4089272 | + | 261 | WP_047645105.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| H4P46_RS20275 () | 4089275..4089553 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| H4P46_RS20280 () | 4089709..4090449 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| H4P46_RS20285 () | 4090420..4091187 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| H4P46_RS20290 () | 4091393..4091971 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| H4P46_RS20295 () | 4092211..4094655 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| H4P46_RS20300 () | 4094698..4095171 | - | 474 | WP_000532698.1 | Ivy family C-type lysozyme inhibitor | - |
| H4P46_RS20305 () | 4095325..4096095 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| H4P46_RS20310 () | 4096136..4097234 | - | 1099 | Protein_3975 | ISAs1 family transposase ISEc1 | Transposase |
| H4P46_RS20315 () | 4097681..4097857 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| H4P46_RS20320 () | 4098054..4098751 | - | 698 | Protein_3977 | IS1 family transposase IS1R | Transposase |
| H4P46_RS20325 () | 4098829..4102973 | - | 4145 | Protein_3978 | hypothetical protein | VF |
| H4P46_RS20330 () | 4103050..4103499 | - | 450 | WP_001372445.1 | hypothetical protein | - |
| H4P46_RS20335 () | 4103570..4104706 | - | 1137 | WP_000420722.1 | ISAs1 family transposase ISEc1 | Transposase |
| H4P46_RS20340 () | 4105175..4105552 | - | 378 | WP_001077738.1 | hypothetical protein | - |
| H4P46_RS20345 () | 4105552..4110072 | - | 4521 | WP_187002336.1 | hypothetical protein | VF |
| H4P46_RS20350 () | 4110148..4112289 | - | 2142 | WP_000103354.1 | hypothetical protein | VF |
| H4P46_RS20355 () | 4112329..4112466 | - | 138 | WP_001297813.1 | hypothetical protein | - |
| H4P46_RS20360 () | 4112499..4113017 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| H4P46_RS20365 () | 4113712..4114212 | + | 501 | WP_000037397.1 | type VI secretion system contractile sheath small subunit | - |
| H4P46_RS20370 () | 4114247..4114471 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| H4P46_RS20375 () | 4114522..4115997 | + | 1476 | WP_000056989.1 | type VI secretion system contractile sheath large subunit | - |
| H4P46_RS20380 () | 4116004..4116417 | + | 414 | WP_000611744.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|