MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 40196 bp
Accession: NZ_CP059963 Location: 1731522..1771717 Organism: Pectobacterium brasiliense strain IPO:3649 NAK:375 Replicon: chromosome
Accession: NZ_CP059963 Location: 1731522..1771717 Organism: Pectobacterium brasiliense strain IPO:3649 NAK:375 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5A23_RS07565 () | 1726608..1730642 | - | 4035 | WP_119870900.1 | hypothetical protein | - |
| H5A23_RS07570 () | 1731187..1731351 | - | 165 | Protein_1475 | DUF4102 domain-containing protein | - |
| H5A23_RS07575 () | 1732496..1733413 | + | 918 | WP_205536562.1 | hypothetical protein | - |
| H5A23_RS07580 () | 1733636..1734169 | + | 534 | WP_205536563.1 | hypothetical protein | - |
| H5A23_RS07585 () | 1734250..1734903 | + | 654 | WP_205536564.1 | hypothetical protein | - |
| H5A23_RS07590 () | 1735651..1737249 | + | 1599 | WP_119870903.1 | TIGR04141 family sporadically distributed protein | - |
| H5A23_RS07595 () | 1737419..1737592 | - | 174 | WP_119870910.1 | DNA cytosine methyltransferase | - |
| H5A23_RS07600 () | 1738257..1740455 | - | 2199 | WP_119870904.1 | DEAD/DEAH box helicase | - |
| H5A23_RS07605 () | 1740452..1741765 | - | 1314 | WP_119870905.1 | ATP-binding protein | - |
| H5A23_RS07610 () | 1741769..1744078 | - | 2310 | WP_119870906.1 | TerB N-terminal domain-containing protein | - |
| H5A23_RS07615 () | 1744843..1745787 | + | 945 | WP_119870391.1 | DUF1738 domain-containing protein | - |
| H5A23_RS07620 () | 1746107..1746343 | + | 237 | WP_029729596.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| H5A23_RS07625 () | 1746346..1746660 | + | 315 | WP_119870392.1 | CcdB family protein | Toxin Detail |
| H5A23_RS07630 () | 1747084..1748082 | + | 999 | WP_119870393.1 | hypothetical protein | - |
| H5A23_RS07635 () | 1748245..1748787 | - | 543 | WP_119870394.1 | DUF3916 domain-containing protein | - |
| H5A23_RS07640 () | 1748984..1749730 | - | 747 | WP_119870395.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H5A23_RS07645 () | 1749739..1751601 | - | 1863 | WP_119870396.1 | type IV secretory system conjugative DNA transfer family protein | - |
| H5A23_RS07650 () | 1752326..1752628 | - | 303 | WP_119870397.1 | conjugal transfer protein | - |
| H5A23_RS07655 () | 1752672..1753688 | - | 1017 | WP_119870398.1 | hypothetical protein | VF |
| H5A23_RS07660 () | 1753678..1754901 | - | 1224 | WP_119870399.1 | hypothetical protein | VF |
| H5A23_RS07665 () | 1754898..1755788 | - | 891 | WP_119870400.1 | P-type conjugative transfer protein VirB9 | - |
| H5A23_RS07670 () | 1755788..1756471 | - | 684 | WP_119870401.1 | type IV secretion system protein | - |
| H5A23_RS07675 () | 1756464..1756604 | - | 141 | WP_025918851.1 | hypothetical protein | - |
| H5A23_RS07680 () | 1756692..1757732 | - | 1041 | WP_119870402.1 | type IV secretion system protein | - |
| H5A23_RS07685 () | 1757744..1757968 | - | 225 | WP_039551199.1 | EexN family lipoprotein | - |
| H5A23_RS07690 () | 1757979..1758695 | - | 717 | WP_119870403.1 | type IV secretion system protein | - |
| H5A23_RS07695 () | 1758719..1761466 | - | 2748 | WP_119870404.1 | hypothetical protein | VF |
| H5A23_RS07700 () | 1761476..1761757 | - | 282 | WP_086002448.1 | TrbC/VirB2 family protein | - |
| H5A23_RS07705 () | 1761754..1762419 | - | 666 | WP_119870405.1 | hypothetical protein | VF |
| H5A23_RS07710 () | 1762498..1762719 | - | 222 | WP_039285692.1 | hypothetical protein | - |
| H5A23_RS07715 () | 1763367..1764578 | + | 1212 | WP_119870406.1 | hypothetical protein | - |
| H5A23_RS07720 () | 1764595..1766277 | + | 1683 | WP_199679133.1 | ATP-binding protein | - |
| H5A23_RS07725 () | 1766422..1766631 | - | 210 | WP_119870408.1 | TraR/DksA family transcriptional regulator | - |
| H5A23_RS07730 () | 1766621..1767205 | - | 585 | WP_119870409.1 | DUF2857 domain-containing protein | - |
| H5A23_RS07735 () | 1767222..1767416 | - | 195 | WP_025918863.1 | AlpA family transcriptional regulator | - |
| H5A23_RS07740 () | 1767570..1768487 | - | 918 | WP_119870410.1 | hypothetical protein | - |
| H5A23_RS07745 () | 1768902..1769174 | - | 273 | WP_014699383.1 | helix-turn-helix domain-containing protein | - |
| H5A23_RS07750 () | 1769321..1769635 | + | 315 | WP_025918866.1 | helix-turn-helix domain-containing protein | - |
| H5A23_RS07755 () | 1769821..1770135 | + | 315 | WP_025918867.1 | helix-turn-helix domain-containing protein | - |
| H5A23_RS07760 () | 1770269..1771540 | - | 1272 | WP_119870412.1 | hypothetical protein ; Integrase | Integrase |
| H5A23_RS07770 () | 1771888..1772685 | - | 798 | WP_119870413.1 | DgsA anti-repressor MtfA | - |
| H5A23_RS07780 () | 1772926..1773311 | - | 386 | Protein_1515 | lysozyme inhibitor LprI family protein | - |
| H5A23_RS07785 () | 1773466..1773633 | + | 168 | WP_010280855.1 | YqaE/Pmp3 family membrane protein | - |
| H5A23_RS07790 () | 1773716..1775191 | - | 1476 | WP_119870550.1 | sensor domain-containing diguanylate cyclase | - |
| H5A23_RS07795 () | 1775475..1776383 | + | 909 | WP_039516916.1 | lipid kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|