MGE detailed information
MGE type: Genomic_island MGE length: 17269 bp
Accession: NZ_CP059962 Location: 4889198..4906466 Organism: Pectobacterium brasiliense strain IPO:3710 NAK:380 Replicon: chromosome
Accession: NZ_CP059962 Location: 4889198..4906466 Organism: Pectobacterium brasiliense strain IPO:3710 NAK:380 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5A25_RS21555 () | 4884302..4885813 | - | 1512 | WP_010284628.1 | leucyl aminopeptidase | - |
| H5A25_RS21560 () | 4886096..4887211 | + | 1116 | WP_039279383.1 | LPS export ABC transporter permease LptF | - |
| H5A25_RS21565 () | 4887211..4888287 | + | 1077 | WP_010284634.1 | LPS export ABC transporter permease LptG | - |
| H5A25_RS21575 () | 4888833..4889938 | + | 1106 | Protein_4212 | Prophage integrase IntA ; Integrase | Integrase |
| H5A25_RS21580 () | 4890425..4891549 | - | 1125 | WP_119871075.1 | hypothetical protein | - |
| H5A25_RS21585 () | 4891552..4893264 | - | 1713 | WP_119871076.1 | AAA family ATPase | - |
| H5A25_RS21590 () | 4893264..4894757 | - | 1494 | WP_119871077.1 | restriction endonuclease subunit S | - |
| H5A25_RS21595 () | 4894754..4896361 | - | 1608 | WP_119871078.1 | N-6 DNA methylase | - |
| H5A25_RS21600 () | 4896608..4896798 | - | 191 | Protein_4217 | DUF3387 domain-containing protein | - |
| H5A25_RS21605 () | 4896789..4896953 | - | 165 | WP_158586004.1 | hypothetical protein | - |
| H5A25_RS21610 () | 4897321..4899684 | + | 2364 | WP_119871079.1 | type I restriction-modification system subunit M | - |
| H5A25_RS21615 () | 4899684..4901033 | + | 1350 | WP_199679142.1 | restriction endonuclease subunit S | - |
| H5A25_RS21620 () | 4901030..4904278 | + | 3249 | WP_119871080.1 | type I restriction endonuclease subunit R | - |
| H5A25_RS21625 () | 4904297..4904482 | + | 186 | Protein_4222 | DUF4942 domain-containing protein | - |
| H5A25_RS21630 () | 4904592..4904840 | + | 249 | WP_119871081.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H5A25_RS21635 () | 4904844..4905119 | + | 276 | WP_119871082.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H5A25_RS21640 () | 4905167..4905679 | + | 513 | WP_119871083.1 | AAA family ATPase | - |
| H5A25_RS21645 () | 4905984..4906466 | - | 483 | WP_014913962.1 | hypothetical protein | - |
| H5A25_RS21650 () | 4906477..4907180 | - | 704 | Protein_4227 | hypothetical protein | - |
| H5A25_RS21655 () | 4907203..4908738 | - | 1536 | WP_119871084.1 | SUMF1/EgtB/PvdO family nonheme iron enzyme | - |
| H5A25_RS21660 () | 4908728..4909960 | - | 1233 | WP_119871085.1 | FtsX-like permease family protein | - |
| H5A25_RS21665 () | 4909941..4910609 | - | 669 | WP_119871086.1 | ATP-binding cassette domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|