MGE detailed information
MGE type: Conjugative plasmid MGE length: 122123 bp
Accession: NZ_CP059919 Location: 1..122123 Organism: Escherichia coli strain 64.1 Replicon: plasmid p2
Accession: NZ_CP059919 Location: 1..122123 Organism: Escherichia coli strain 64.1 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5C78_RS25975 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| H5C78_RS25980 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| H5C78_RS25985 () | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| H5C78_RS25990 () | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| H5C78_RS25995 () | 3639..4211 | + | 573 | Protein_4 | EamA family transporter | - |
| H5C78_RS26000 () | 4243..5442 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| H5C78_RS26005 () | 5548..6198 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H5C78_RS26010 () | 6230..6472 | - | 243 | WP_000844627.1 | transposase | - |
| H5C78_RS26015 () | 7475..7909 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| H5C78_RS26020 () | 7981..8331 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| H5C78_RS26025 () | 8345..8620 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| H5C78_RS26030 () | 8656..9078 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| H5C78_RS26035 () | 9130..10824 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| H5C78_RS26040 () | 10842..11204 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| H5C78_RS26045 () | 11201..11437 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| H5C78_RS26050 () | 11473..12141 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| H5C78_RS26055 () | 12216..13895 | + | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| H5C78_RS26060 () | 13898..14758 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| H5C78_RS26065 () | 14860..16383 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| H5C78_RS26070 () | 16370..17155 | + | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| H5C78_RS26075 () | 17331..17831 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| H5C78_RS26080 () | 17959..18798 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| H5C78_RS26085 () | 18792..19139 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| H5C78_RS26090 () | 19357..20592 | - | 1236 | WP_001137513.1 | IS256-like element ISEc58 family transposase | - |
| H5C78_RS26095 () | 20860..22389 | - | 1530 | WP_001137772.1 | IS91 family transposase | - |
| H5C78_RS26100 () | 22578..24215 | - | 1638 | WP_000719078.1 | chaperonin GroEL | - |
| H5C78_RS26105 () | 24271..24591 | - | 321 | WP_000535481.1 | co-chaperone GroES | - |
| H5C78_RS26110 () | 24798..25697 | - | 900 | WP_000131886.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| H5C78_RS26115 () | 25864..26655 | - | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| H5C78_RS26120 () | 26804..27817 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| H5C78_RS26125 () | 28020..28370 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| H5C78_RS26130 () | 28496..29056 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| H5C78_RS26135 () | 29059..32025 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| H5C78_RS26140 () | 32034..32450 | + | 417 | WP_031610367.1 | hypothetical protein | - |
| H5C78_RS26145 () | 32927..33193 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| H5C78_RS26150 () | 33193..33687 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| H5C78_RS26155 () | 33743..34345 | - | 603 | WP_000517689.1 | hypothetical protein | - |
| H5C78_RS26160 () | 34699..36045 | + | 1347 | WP_001132019.1 | hypothetical protein | - |
| H5C78_RS26165 () | 36324..36500 | + | 177 | WP_182917284.1 | hypothetical protein | - |
| H5C78_RS26170 () | 36534..37231 | + | 698 | Protein_39 | IS1 family transposase IS1S | Transposase |
| H5C78_RS26175 () | 37707..38981 | + | 1275 | WP_024133855.1 | colicin-Ia | - |
| H5C78_RS26180 () | 38999..39346 | - | 348 | WP_000762580.1 | hypothetical protein | - |
| H5C78_RS26185 () | 39465..39812 | + | 348 | WP_000142424.1 | hypothetical protein | - |
| H5C78_RS26190 () | 39830..40420 | - | 591 | WP_000194561.1 | hypothetical protein | - |
| H5C78_RS26195 () | 40417..40677 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| H5C78_RS26200 () | 41246..41659 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| H5C78_RS26205 () | 41661..42446 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| H5C78_RS26210 () | 43030..43662 | + | 633 | WP_000312331.1 | ParA family protein | - |
| H5C78_RS26215 () | 43662..44036 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| H5C78_RS26220 () | 44275..45249 | + | 975 | WP_001217836.1 | hypothetical protein | - |
| H5C78_RS26225 () | 45253..45645 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| H5C78_RS26230 () | 46326..47228 | + | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| H5C78_RS26235 () | 47225..47537 | + | 313 | Protein_52 | hypothetical protein | - |
| H5C78_RS26240 () | 47613..48296 | + | 684 | WP_000086147.1 | DNA methylase | - |
| H5C78_RS26245 () | 48297..48518 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| H5C78_RS26250 () | 48532..48966 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| H5C78_RS26255 () | 49012..49788 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| H5C78_RS26260 () | 50329..50631 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| H5C78_RS26265 () | 50678..51100 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| H5C78_RS26270 () | 51097..51288 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| H5C78_RS26275 () | 51359..51673 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| H5C78_RS26280 () | 52057..52584 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| H5C78_RS26285 () | 52642..52875 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| H5C78_RS26290 () | 52934..54892 | + | 1959 | WP_182917283.1 | ParB/RepB/Spo0J family partition protein | - |
| H5C78_RS26295 () | 54947..55381 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| H5C78_RS26300 () | 55378..56097 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| H5C78_RS26305 () | 56094..56690 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| H5C78_RS26310 () | 57152..57652 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| H5C78_RS26315 () | 58381..58815 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| H5C78_RS26320 () | 58909..59175 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| H5C78_RS26325 () | 59240..60178 | + | 939 | WP_000078704.1 | Recombination-promoting nuclease RpnA | VF |
| H5C78_RS26330 () | 60201..60398 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| H5C78_RS26335 () | 60429..60680 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| H5C78_RS26340 () | 60714..60911 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| H5C78_RS26345 () | 61260..62108 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| H5C78_RS26350 () | 62194..62529 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H5C78_RS26355 () | 62762..63094 | + | 333 | WP_001281051.1 | hypothetical protein | - |
| H5C78_RS26360 () | 63105..65804 | + | 2700 | WP_001354015.1 | Protein TraI | Relaxase |
| H5C78_RS26365 () | 65841..68132 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| H5C78_RS26370 () | 68125..69195 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| H5C78_RS26375 () | 69214..70422 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 70602..70659 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 70602..70659 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 70602..70659 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 70602..70659 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| H5C78_RS26380 () | 70714..70866 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| H5C78_RS26385 () | 70938..71078 | - | 141 | WP_000880644.1 | hypothetical protein | - |
| H5C78_RS26390 () | 71489..71785 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| H5C78_RS26395 () | 71850..72026 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| H5C78_RS26400 () | 72418..72627 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| H5C78_RS26405 () | 72699..73361 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H5C78_RS26410 () | 73426..75588 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| H5C78_RS26415 () | 75685..76269 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| H5C78_RS26420 () | 76298..77500 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| H5C78_RS26425 () | 77467..78081 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| H5C78_RS26430 () | 78081..81125 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| H5C78_RS26435 () | 81215..82015 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| H5C78_RS26440 () | 81999..82187 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H5C78_RS26445 () | 82251..82655 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| H5C78_RS26450 () | 82706..83233 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H5C78_RS26455 () | 83233..83937 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| H5C78_RS26460 () | 84050..84475 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| H5C78_RS26465 () | 84472..84822 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| H5C78_RS26470 () | 84853..86466 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| H5C78_RS26475 () | 86453..87766 | - | 1314 | WP_182917282.1 | conjugal transfer protein TraO | - |
| H5C78_RS26480 () | 87769..88752 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| H5C78_RS26485 () | 88763..89455 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| H5C78_RS26490 () | 89452..89799 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H5C78_RS26495 () | 89817..93584 | - | 3768 | WP_001141527.1 | DNA primase | - |
| H5C78_RS26500 () | 93673..94224 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| H5C78_RS26505 () | 94239..94529 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| H5C78_RS26510 () | 94526..95674 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| H5C78_RS26515 () | 95671..96489 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| H5C78_RS26520 () | 96486..96944 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| H5C78_RS26525 () | 97339..97923 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| H5C78_RS26530 () | 97983..99185 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| H5C78_RS26535 () | 99270..100094 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| H5C78_RS26540 () | 100245..101399 | - | 1155 | WP_001139957.1 | integrase | - |
| H5C78_RS26545 () | 101398..101673 | + | 276 | WP_000958118.1 | hypothetical protein | - |
| H5C78_RS26550 () | 101670..101918 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| H5C78_RS26555 () | 103020..103352 | + | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| H5C78_RS26560 () | 103399..104274 | - | 876 | WP_013188473.1 | Beta-lactamase CTX-M-1 | ARG |
| H5C78_RS26565 () | 104562..105824 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| H5C78_RS26570 () | 106042..107136 | - | 1095 | Protein_119 | hypothetical protein | VF |
| H5C78_RS26575 () | 107136..107792 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| H5C78_RS26580 () | 107777..108337 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| H5C78_RS26585 () | 108347..108961 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| H5C78_RS26590 () | 108979..110076 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H5C78_RS26595 () | 110089..111642 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H5C78_RS26600 () | 111653..112105 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| H5C78_RS26605 () | 112092..113387 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| H5C78_RS26610 () | 113380..115062 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H5C78_RS26615 () | 115076..115513 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| H5C78_RS26620 () | 115513..116580 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| H5C78_RS26625 () | 117204..117500 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| H5C78_RS26630 () | 117676..117930 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| H5C78_RS26635 () | 118092..118643 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| H5C78_RS26640 () | 118816..119499 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| H5C78_RS26645 () | 119753..120286 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| H5C78_RS26650 () | 120728..121015 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H5C78_RS26655 () | 120933..121196 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|