MGE detailed information
MGE type: Prophage MGE length: 37046 bp
Accession: NZ_CP059917 Location: 4505909..4542954 Organism: Escherichia coli strain 64.1 Replicon: chromosome
Accession: NZ_CP059917 Location: 4505909..4542954 Organism: Escherichia coli strain 64.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5C78_RS21695 () | 4501698..4502735 | - | 1038 | WP_000236278.1 | oxidoreductase | - |
| H5C78_RS21700 () | 4503069..4503557 | + | 489 | WP_001318084.1 | N-acetyltransferase | - |
| H5C78_RS21705 () | 4503617..4505362 | - | 1746 | WP_001696277.1 | gamma-glutamyltransferase | - |
| H5C78_RS21710 () | 4505482..4505922 | + | 441 | WP_000825996.1 | DUF2756 family protein | - |
| H5C78_RS21715 () | 4505909..4506652 | - | 744 | WP_000073619.1 | glycerophosphodiester phosphodiesterase | - |
| H5C78_RS21720 () | 4506649..4507719 | - | 1071 | WP_182917239.1 | hypothetical protein | VF |
| H5C78_RS21725 () | 4507721..4508566 | - | 846 | WP_000572164.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| H5C78_RS21730 () | 4508563..4509450 | - | 888 | WP_000099289.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| H5C78_RS21735 () | 4509626..4510942 | - | 1317 | WP_000803191.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| H5C78_RS21740 () | 4511151..4511528 | - | 378 | WP_000155159.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| H5C78_RS21745 () | 4511525..4511746 | - | 222 | WP_000557315.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| H5C78_RS21750 () | 4511834..4512547 | - | 714 | WP_000416895.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| H5C78_RS21755 () | 4512549..4513316 | - | 768 | WP_000082101.1 | hypothetical protein | VF |
| H5C78_RS21760 () | 4513313..4514590 | - | 1278 | WP_000803825.1 | branched chain amino acid ABC transporter permease LivM | - |
| H5C78_RS21765 () | 4514587..4515513 | - | 927 | WP_000003010.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| H5C78_RS21770 () | 4515561..4516670 | - | 1110 | WP_001318085.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| H5C78_RS21775 () | 4517094..4517477 | + | 384 | WP_000778791.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| H5C78_RS21780 () | 4517665..4518768 | - | 1104 | WP_001021996.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| H5C78_RS21785 () | 4519040..4519894 | - | 855 | WP_000130217.1 | RNA polymerase sigma factor RpoH | - |
| H5C78_RS21790 () | 4520139..4521197 | - | 1059 | WP_001042003.1 | permease-like cell division protein FtsX | - |
| H5C78_RS21795 () | 4521190..4521858 | - | 669 | WP_000617723.1 | hypothetical protein | VF |
| H5C78_RS21800 () | 4521861..4523357 | - | 1497 | WP_001040613.1 | hypothetical protein | VF |
| H5C78_RS21805 () | 4523507..4524103 | + | 597 | WP_000743193.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase | - |
| H5C78_RS21810 () | 4524093..4524362 | + | 270 | WP_001295207.1 | DUF1145 family protein | - |
| H5C78_RS21815 () | 4524365..4524724 | - | 360 | WP_000042885.1 | DUF2500 domain-containing protein | - |
| H5C78_RS21820 () | 4524865..4525491 | + | 627 | WP_000964718.1 | lysoplasmalogenase | - |
| H5C78_RS21825 () | 4525565..4527763 | + | 2199 | WP_000106587.1 | Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA | - |
| H5C78_RS21830 () | 4528032..4528277 | - | 246 | WP_000130619.1 | sulfurtransferase TusA | - |
| H5C78_RS21835 () | 4528499..4529164 | + | 666 | WP_001100463.1 | 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | - |
| H5C78_RS21840 () | 4529237..4529794 | + | 558 | WP_001245296.1 | phage sensitivity protein DcrB | - |
| H5C78_RS21845 () | 4529798..4531048 | - | 1251 | WP_001298004.1 | MFS transporter | - |
| H5C78_RS21850 () | 4531147..4532196 | + | 1050 | WP_001297848.1 | AI-2E family transporter | - |
| H5C78_RS21855 () | 4532251..4532838 | + | 588 | WP_000285764.1 | hypothetical protein | VF |
| H5C78_RS21860 () | 4532949..4534523 | + | 1575 | WP_000953341.1 | nickel ABC transporter substrate-binding protein | - |
| H5C78_RS21865 () | 4534523..4535467 | + | 945 | WP_000947063.1 | nickel ABC transporter permease subunit NikB | - |
| H5C78_RS21870 () | 4535464..4536297 | + | 834 | WP_021539320.1 | nickel ABC transporter permease subunit NikC | - |
| H5C78_RS21875 () | 4536297..4537061 | + | 765 | WP_001136206.1 | nickel import ATP-binding protein NikD | - |
| H5C78_RS21880 () | 4537058..4537864 | + | 807 | WP_000173650.1 | hypothetical protein | VF |
| H5C78_RS21885 () | 4537870..4538271 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| H5C78_RS21890 () | 4538391..4538750 | - | 360 | WP_000593557.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| H5C78_RS21895 () | 4538747..4539022 | - | 276 | WP_075861597.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| H5C78_RS21900 () | 4539095..4540219 | - | 1125 | WP_001318088.1 | ABC transporter permease | - |
| H5C78_RS21905 () | 4540219..4542954 | - | 2736 | WP_000149178.1 | hypothetical protein | VF |
| H5C78_RS21910 () | 4542951..4544018 | - | 1068 | WP_000361470.1 | HlyD family secretion protein | - |
| H5C78_RS21915 () | 4544766..4545818 | + | 1053 | WP_001318089.1 | DUF2776 family protein | - |
| H5C78_RS21920 () | 4545905..4547098 | - | 1194 | WP_000439204.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|