MGE detailed information
MGE type: Genomic_island MGE length: 63267 bp
Accession: NZ_CP059917 Location: 284082..347348 Organism: Escherichia coli strain 64.1 Replicon: chromosome
Accession: NZ_CP059917 Location: 284082..347348 Organism: Escherichia coli strain 64.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5C78_RS01295 () | 280814..281533 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| H5C78_RS01300 () | 281530..283161 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| H5C78_RS01305 () | 283341..283571 | + | 231 | WP_000371717.1 | (4Fe-4S)-binding protein | - |
| H5C78_RS01310 () | 283583..283855 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| H5C78_RS01315 () | 284082..284378 | + | 297 | WP_001317561.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| H5C78_RS01320 () | 284406..284579 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| H5C78_RS01325 () | 284698..286215 | - | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| H5C78_RS01330 () | 286452..287909 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| H5C78_RS01335 () | 287968..290115 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| H5C78_RS01340 () | 290195..291529 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| H5C78_RS01345 () | 291895..293433 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| H5C78_RS01350 () | 294316..294642 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H5C78_RS01355 () | 294639..294902 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| H5C78_RS01360 () | 294974..295840 | - | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| H5C78_RS01365 () | 295925..296122 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| H5C78_RS01370 () | 296134..296622 | - | 489 | WP_000761677.1 | hypothetical protein | - |
| H5C78_RS01375 () | 296619..296996 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| H5C78_RS01380 () | 297043..297417 | - | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| H5C78_RS01385 () | 297497..297718 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| H5C78_RS01390 () | 297781..298257 | - | 477 | WP_001366855.1 | RadC family protein | - |
| H5C78_RS01395 () | 298273..298752 | - | 480 | WP_120136233.1 | antirestriction protein | - |
| H5C78_RS01400 () | 298834..299652 | - | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| H5C78_RS01405 () | 299742..299975 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| H5C78_RS01410 () | 299981..300658 | - | 678 | WP_182917248.1 | hypothetical protein | - |
| H5C78_RS01415 () | 300777..301661 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| H5C78_RS01420 () | 301768..302700 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| H5C78_RS01425 () | 302697..303506 | - | 810 | WP_023155731.1 | hypothetical protein | - |
| H5C78_RS01430 () | 305257..305988 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| H5C78_RS01435 () | 306082..306739 | - | 658 | Protein_274 | transposase | - |
| H5C78_RS01440 () | 307173..308777 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| H5C78_RS01445 () | 310340..310906 | + | 567 | WP_001126807.1 | inovirus-type Gp2 protein | - |
| H5C78_RS01450 () | 311152..311722 | + | 571 | Protein_277 | hypothetical protein | - |
| H5C78_RS01455 () | 311791..312015 | + | 225 | Protein_278 | AlpA family transcriptional regulator | - |
| H5C78_RS01460 () | 312288..312924 | - | 637 | Protein_279 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| H5C78_RS01465 () | 313197..314352 | + | 1156 | Protein_280 | oligogalacturonate lyase | - |
| H5C78_RS01470 () | 314382..315183 | + | 802 | Protein_281 | hypothetical protein | VF |
| H5C78_RS01475 () | 315238..315555 | + | 318 | WP_182917249.1 | cupin domain-containing protein | - |
| H5C78_RS01480 () | 315806..317031 | - | 1226 | Protein_283 | IS3 family transposase IS2 | Transposase |
| H5C78_RS01485 () | 317230..317604 | + | 375 | Protein_284 | DDE-type integrase/transposase/recombinase | - |
| H5C78_RS01490 () | 318116..318904 | + | 789 | WP_001696174.1 | DeoR family transcriptional regulator | - |
| H5C78_RS01495 () | 319022..319495 | + | 474 | WP_001696173.1 | PTS sugar transporter subunit IIB | - |
| H5C78_RS01500 () | 319514..320284 | + | 771 | WP_001696172.1 | PTS sugar transporter subunit IIC | - |
| H5C78_RS01505 () | 320274..321140 | + | 867 | WP_001767853.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| H5C78_RS01510 () | 321150..321587 | + | 438 | WP_001696170.1 | PTS sugar transporter subunit IIA | - |
| H5C78_RS01515 () | 321668..322702 | + | 1035 | WP_001696169.1 | glycoside hydrolase family 88 protein | - |
| H5C78_RS01520 () | 322736..324193 | + | 1458 | WP_077250607.1 | DUF2264 domain-containing protein | - |
| H5C78_RS01525 () | 324238..325242 | + | 1005 | WP_001767848.1 | hypothetical protein | - |
| H5C78_RS01530 () | 325303..327660 | + | 2358 | WP_001696167.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| H5C78_RS01535 () | 327670..330357 | + | 2688 | WP_001696166.1 | autotransporter domain-containing protein | - |
| H5C78_RS01540 () | 330393..330536 | + | 144 | WP_001767846.1 | hypothetical protein | - |
| H5C78_RS01545 () | 330704..330916 | - | 213 | Protein_296 | transposase | - |
| H5C78_RS01555 () | 332213..332827 | + | 615 | Protein_298 | hypothetical protein | VF |
| H5C78_RS01560 () | 333501..333821 | - | 321 | WP_001334006.1 | IS3 family transposase | - |
| H5C78_RS01565 () | 335069..335293 | + | 225 | WP_024210520.1 | hypothetical protein | - |
| H5C78_RS01570 () | 335422..335946 | - | 525 | WP_000823671.1 | Adenylyl-sulfate kinase | VF |
| H5C78_RS01575 () | 336073..337443 | - | 1371 | Protein_302 | IS66 family transposase ISEc23 | Transposase |
| H5C78_RS01580 () | 337474..337824 | - | 351 | WP_000624717.1 | IS66 family transposase IS682 | Transposase |
| H5C78_RS01585 () | 337821..337928 | - | 108 | Protein_304 | IS66 family insertion sequence element accessory protein TnpB | - |
| H5C78_RS01590 () | 338199..338513 | - | 315 | WP_182917250.1 | helix-turn-helix domain-containing protein | - |
| H5C78_RS01595 () | 338625..339659 | + | 1035 | WP_029396327.1 | permease | - |
| H5C78_RS01600 () | 339672..340949 | + | 1278 | WP_000610829.1 | ISL3 family transposase ISPst2 | Transposase |
| H5C78_RS01605 () | 341045..341239 | - | 195 | Protein_308 | IS66 family transposase ISEc23 | Transposase |
| H5C78_RS01610 () | 341325..342560 | + | 1236 | Protein_309 | IS3 family transposase ISKpn38 | Transposase |
| H5C78_RS01615 () | 342622..342867 | + | 246 | Protein_310 | IS91 family transposase | - |
| H5C78_RS01620 () | 343452..346949 | + | 3498 | WP_001360336.1 | hypothetical protein | VF |
| H5C78_RS01625 () | 346971..347668 | - | 698 | Protein_312 | IS1 family transposase IS1A | Transposase |
| H5C78_RS01630 () | 347735..348250 | + | 516 | Protein_313 | transposase | - |
| H5C78_RS01635 () | 348575..349300 | - | 726 | WP_097719232.1 | hypothetical protein | - |
| H5C78_RS01640 () | 349351..350400 | - | 1050 | WP_001470099.1 | porin | - |
| H5C78_RS01645 () | 350819..352189 | + | 1371 | WP_001470100.1 | adenylosuccinate lyase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|