MGE detailed information
MGE type: Prophage MGE length: 65014 bp
Accession: NZ_CP059917 Location: 2171127..2236140 Organism: Escherichia coli strain 64.1 Replicon: chromosome
Accession: NZ_CP059917 Location: 2171127..2236140 Organism: Escherichia coli strain 64.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5C78_RS10430 () | 2166776..2167282 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| H5C78_RS10435 () | 2167401..2168366 | + | 966 | WP_001317797.1 | L-Ala-D/L-Glu epimerase | - |
| H5C78_RS10440 () | 2168341..2169069 | - | 729 | WP_001296042.1 | murein tripeptide amidase MpaA | - |
| H5C78_RS10445 () | 2169360..2169998 | - | 639 | WP_000800179.1 | SDR family oxidoreductase | - |
| H5C78_RS10450 () | 2169995..2170069 | - | 75 | WP_122083107.1 | hypothetical protein | - |
| H5C78_RS10455 () | 2170069..2170989 | - | 921 | WP_025491800.1 | alpha/beta hydrolase | - |
| H5C78_RS10460 () | 2171127..2172026 | + | 900 | WP_000817700.1 | hypothetical protein | VF |
| H5C78_RS10465 () | 2172363..2173976 | + | 1614 | WP_000682999.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| H5C78_RS10470 () | 2174027..2175058 | - | 1032 | WP_000559883.1 | low conductance mechanosensitive channel YnaI | - |
| H5C78_RS10475 () | 2175302..2175559 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| H5C78_RS10480 () | 2175609..2176559 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| H5C78_RS10485 () | 2176711..2177463 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| H5C78_RS10490 () | 2177658..2178173 | - | 516 | WP_000945000.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| H5C78_RS10495 () | 2178184..2178327 | - | 144 | Protein_2047 | AbgT family transporter | - |
| H5C78_RS10500 () | 2178717..2179532 | - | 816 | WP_000156573.1 | hypothetical protein | VF |
| H5C78_RS10505 () | 2179629..2180657 | + | 1029 | WP_000587186.1 | hypothetical protein | VF |
| H5C78_RS10510 () | 2180654..2182168 | + | 1515 | WP_032193479.1 | DHA2 family efflux MFS transporter permease subunit | - |
| H5C78_RS10515 () | 2182363..2182926 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| H5C78_RS10520 () | 2182947..2184179 | - | 1233 | WP_001306539.1 | diguanylate cyclase DgcM | - |
| H5C78_RS10525 () | 2184434..2185417 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| H5C78_RS10530 () | 2185692..2185865 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| H5C78_RS10535 () | 2185895..2187268 | + | 1374 | WP_001272254.1 | ATP-dependent RNA helicase DbpA | - |
| H5C78_RS10540 () | 2187397..2188332 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| H5C78_RS10545 () | 2188384..2189619 | - | 1236 | WP_000040851.1 | hypothetical protein ; Integrase | Integrase |
| H5C78_RS10550 () | 2189621..2189836 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| H5C78_RS10555 () | 2189936..2190124 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2189940..2190118 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2189940..2190118 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2189940..2190118 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2189940..2190118 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| H5C78_RS10560 () | 2190117..2190311 | - | 195 | WP_042038331.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| H5C78_RS10565 () | 2190368..2191177 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| H5C78_RS10570 () | 2191170..2193770 | - | 2601 | WP_000105139.1 | exodeoxyribonuclease VIII | - |
| H5C78_RS10575 () | 2193872..2194147 | - | 276 | WP_000632297.1 | protein RacC | - |
| H5C78_RS10580 () | 2194222..2194392 | - | 171 | WP_182917270.1 | hypothetical protein | - |
| H5C78_RS10585 () | 2194392..2194613 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| H5C78_RS10590 () | 2195055..2195543 | + | 489 | WP_010377803.1 | superinfection exclusion B family protein | - |
| H5C78_RS10595 () | 2195540..2195695 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| H5C78_RS10600 () | 2196149..2196625 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| H5C78_RS10605 () | 2196749..2197045 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| H5C78_RS10610 () | 2197068..2197490 | + | 423 | WP_000693797.1 | phage protein | - |
| H5C78_RS10615 () | 2197503..2198360 | + | 858 | WP_000899746.1 | DUF1376 domain-containing protein | - |
| H5C78_RS10620 () | 2198367..2199113 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| H5C78_RS10625 () | 2199136..2199897 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| H5C78_RS10630 () | 2199913..2200335 | + | 423 | WP_025492043.1 | DUF977 family protein | - |
| H5C78_RS10635 () | 2200542..2201096 | - | 555 | WP_025492044.1 | hypothetical protein | - |
| H5C78_RS10640 () | 2201093..2202025 | - | 933 | WP_025492045.1 | hypothetical protein | - |
| H5C78_RS10645 () | 2202451..2202606 | + | 156 | WP_021554378.1 | type I toxin-antitoxin system Hok family toxin | - |
| H5C78_RS10650 () | 2203070..2203669 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| H5C78_RS10655 () | 2203669..2203959 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| H5C78_RS10660 () | 2203956..2204498 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| H5C78_RS10665 () | 2205543..2205971 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| H5C78_RS10670 () | 2206143..2206517 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| H5C78_RS10675 () | 2206769..2206984 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| H5C78_RS10680 () | 2206984..2207481 | + | 498 | WP_001135285.1 | lysozyme RrrD | - |
| H5C78_RS10685 () | 2207698..2207883 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| H5C78_RS10690 () | 2208080..2209537 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| H5C78_RS10695 () | 2209675..2210466 | + | 792 | WP_016232661.1 | ParB/Srx family N-terminal domain-containing protein | - |
| H5C78_RS10700 () | 2210459..2211391 | + | 933 | WP_001742940.1 | hypothetical protein | - |
| H5C78_RS10705 () | 2211327..2211578 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| H5C78_RS10710 () | 2211582..2212676 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| H5C78_RS10715 () | 2212657..2213958 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| H5C78_RS10720 () | 2213961..2215367 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| H5C78_RS10725 () | 2215351..2216463 | + | 1113 | WP_001703133.1 | hypothetical protein | - |
| H5C78_RS10730 () | 2216568..2217332 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| H5C78_RS10735 () | 2217431..2218570 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| H5C78_RS10740 () | 2218613..2218789 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| H5C78_RS10745 () | 2218793..2219188 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| H5C78_RS10750 () | 2219188..2219571 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| H5C78_RS10755 () | 2219572..2219952 | + | 381 | WP_025492053.1 | hypothetical protein | - |
| H5C78_RS10760 () | 2219949..2220341 | + | 393 | WP_025492054.1 | electron transfer flavoprotein subunit beta | - |
| H5C78_RS10765 () | 2220368..2221297 | + | 930 | WP_001314678.1 | hypothetical protein | - |
| H5C78_RS10770 () | 2221480..2221839 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| H5C78_RS10775 () | 2221947..2222147 | + | 201 | WP_001755909.1 | hypothetical protein | - |
| H5C78_RS10780 () | 2222313..2225546 | + | 3234 | WP_024240902.1 | phage tail tape measure protein | - |
| H5C78_RS10785 () | 2225539..2225876 | + | 338 | Protein_2105 | phage tail protein | - |
| H5C78_RS10790 () | 2225876..2226574 | + | 699 | WP_182917271.1 | phage minor tail protein L | - |
| H5C78_RS10795 () | 2226580..2227323 | + | 744 | WP_001695586.1 | C40 family peptidase | - |
| H5C78_RS10800 () | 2227260..2227862 | + | 603 | WP_050541368.1 | tail assembly protein | - |
| H5C78_RS10805 () | 2227923..2231420 | + | 3498 | WP_041498248.1 | host specificity protein J | - |
| H5C78_RS10810 () | 2231491..2232090 | + | 600 | WP_001695589.1 | hypothetical protein | VF |
| H5C78_RS10815 () | 2232155..2235556 | + | 3402 | WP_001695591.1 | prophage tail fiber N-terminal domain-containing protein | - |
| H5C78_RS10820 () | 2235556..2236140 | + | 585 | WP_041498247.1 | tail fiber assembly protein | - |
| H5C78_RS10825 () | 2236353..2237210 | - | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| H5C78_RS10830 () | 2237207..2238064 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| H5C78_RS10835 () | 2238061..2238888 | - | 828 | WP_000983721.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| H5C78_RS10840 () | 2238888..2239802 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| H5C78_RS10845 () | 2240387..2240821 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|