MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 51601 bp
Accession: NZ_CP059838 Location: 1..51601 Organism: Escherichia coli strain tcmA_3 Replicon: plasmid pTET_A3_4
Accession: NZ_CP059838 Location: 1..51601 Organism: Escherichia coli strain tcmA_3 Replicon: plasmid pTET_A3_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQF93_RS28165 | 261..1265 | + | 1005 | WP_001364568.1 | Tn3 family transposase | - |
| GQF93_RS26985 (GQF93_26975) | 1323..1565 | + | 243 | WP_000844627.1 | transposase | - |
| GQF93_RS26990 (GQF93_26980) | 1597..2248 | - | 652 | Protein_3 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GQF93_RS26995 (GQF93_26985) | 2354..3553 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| GQF93_RS27000 (GQF93_26990) | 3585..4469 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| GQF93_RS27005 (GQF93_26995) | 4609..5009 | - | 401 | Protein_6 | isochorismatase family protein | - |
| GQF93_RS27010 (GQF93_27000) | 5004..6756 | + | 1753 | Protein_7 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GQF93_RS27015 (GQF93_27005) | 6828..7544 | + | 717 | Protein_8 | Type IV secretion system protein virB10 | VF |
| GQF93_RS27020 (GQF93_27010) | 7546..8577 | + | 1032 | WP_001058470.1 | Type IV secretion system protein VirB11 | VF |
| GQF93_RS27025 (GQF93_27015) | 8580..10415 | + | 1836 | WP_212487707.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GQF93_RS27030 (GQF93_27020) | 10412..10825 | + | 414 | WP_212487709.1 | cag pathogenicity island Cag12 family protein | - |
| GQF93_RS27035 (GQF93_27025) | 10822..11124 | + | 303 | WP_000820912.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| GQF93_RS27040 (GQF93_27030) | 11237..11431 | + | 195 | Protein_13 | ATP-binding protein | - |
| GQF93_RS27045 (GQF93_27035) | 11435..12007 | + | 573 | WP_001198960.1 | hypothetical protein | - |
| GQF93_RS27050 (GQF93_27040) | 12012..14165 | + | 2154 | WP_212487711.1 | type IA DNA topoisomerase | - |
| GQF93_RS27055 (GQF93_27045) | 14162..14368 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| GQF93_RS27060 (GQF93_27050) | 14384..14845 | + | 462 | WP_212487713.1 | H-NS family nucleoid-associated regulatory protein | - |
| GQF93_RS27065 (GQF93_27055) | 14896..15159 | + | 264 | WP_000072657.1 | hypothetical protein | - |
| GQF93_RS27070 (GQF93_27060) | 15335..16660 | - | 1326 | WP_212487715.1 | hypothetical protein | - |
| GQF93_RS27075 (GQF93_27065) | 16706..17071 | - | 366 | WP_212487718.1 | hypothetical protein | - |
| GQF93_RS27085 (GQF93_27075) | 18363..18833 | - | 471 | WP_251365478.1 | hypothetical protein | - |
| GQF93_RS28325 | 19315..19416 | + | 102 | WP_271232226.1 | DinQ-like type I toxin DqlB | - |
| GQF93_RS27090 (GQF93_27080) | 19910..20422 | - | 513 | WP_212487720.1 | hypothetical protein | - |
| GQF93_RS27095 (GQF93_27085) | 20419..20619 | - | 201 | WP_052921392.1 | hypothetical protein | - |
| GQF93_RS27100 (GQF93_27090) | 20783..21208 | + | 426 | WP_243040820.1 | hypothetical protein | - |
| GQF93_RS27105 (GQF93_27095) | 21587..22561 | + | 975 | WP_212487722.1 | Abi family protein | - |
| GQF93_RS27110 (GQF93_27100) | 22650..23441 | - | 792 | WP_212487724.1 | malate dehydrogenase | - |
| GQF93_RS27115 (GQF93_27105) | 23660..24388 | - | 729 | WP_212487726.1 | hypothetical protein | - |
| GQF93_RS27120 (GQF93_27110) | 24385..25215 | - | 831 | WP_000301511.1 | hypothetical protein | - |
| GQF93_RS27125 (GQF93_27115) | 25542..25988 | + | 447 | WP_212487727.1 | hypothetical protein | - |
| GQF93_RS27130 (GQF93_27120) | 26897..26980 | + | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| GQF93_RS27135 (GQF93_27125) | 27555..27884 | + | 330 | WP_061327257.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GQF93_RS27140 (GQF93_27130) | 27865..28146 | + | 282 | WP_039061534.1 | helix-turn-helix transcriptional regulator | - |
| GQF93_RS27145 (GQF93_27135) | 28293..30506 | - | 2214 | WP_080095547.1 | AAA family ATPase | - |
| GQF93_RS27150 (GQF93_27140) | 30640..31287 | - | 648 | WP_212487692.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GQF93_RS27155 (GQF93_27145) | 31582..32202 | + | 621 | WP_000864791.1 | ParA family protein | - |
| GQF93_RS27160 (GQF93_27150) | 32254..32484 | + | 231 | WP_000051063.1 | plasmid partition protein ParG | - |
| GQF93_RS27165 (GQF93_27155) | 32500..32811 | + | 312 | WP_001423339.1 | hypothetical protein | - |
| GQF93_RS27170 (GQF93_27160) | 33246..33392 | + | 147 | WP_251365475.1 | hypothetical protein | - |
| GQF93_RS28170 | 33386..33841 | + | 456 | WP_251365476.1 | YcxB family protein | - |
| GQF93_RS27180 (GQF93_27170) | 33893..34249 | - | 357 | WP_000876433.1 | DNA distortion polypeptide 3 | - |
| GQF93_RS27185 (GQF93_27175) | 34386..34832 | - | 447 | WP_157701447.1 | hypothetical protein | - |
| GQF93_RS27190 (GQF93_27180) | 34836..35687 | - | 852 | WP_212487694.1 | replication initiation protein | - |
| GQF93_RS27195 (GQF93_27185) | 35692..36561 | - | 870 | WP_032347905.1 | replication initiation protein | - |
| GQF93_RS27200 (GQF93_27190) | 37626..37877 | + | 252 | WP_212487696.1 | plasmid stabilization protein | Antitoxin Detail |
| GQF93_RS27205 (GQF93_27195) | 37867..38148 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GQF93_RS27210 (GQF93_27200) | 38294..38617 | + | 324 | WP_001181906.1 | hypothetical protein | - |
| GQF93_RS27215 (GQF93_27205) | 38665..38910 | + | 246 | WP_000356542.1 | hypothetical protein | - |
| GQF93_RS27220 (GQF93_27210) | 38900..39115 | + | 216 | WP_001180117.1 | hypothetical protein | - |
| GQF93_RS27225 (GQF93_27215) | 39208..39537 | + | 330 | WP_212487698.1 | hypothetical protein | - |
| GQF93_RS27230 (GQF93_27220) | 39580..39759 | + | 180 | WP_000439079.1 | hypothetical protein | - |
| GQF93_RS27235 (GQF93_27225) | 39829..39978 | + | 150 | WP_212487700.1 | hypothetical protein | - |
| GQF93_RS27240 (GQF93_27230) | 39991..40263 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| GQF93_RS27250 (GQF93_27240) | 40589..41134 | + | 546 | WP_000757692.1 | DNA distortion polypeptide 1 | - |
| GQF93_RS27255 (GQF93_27245) | 41137..42303 | + | 1167 | WP_000539539.1 | hypothetical protein | Relaxase |
| GQF93_RS27260 (GQF93_27250) | 42656..43174 | + | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| GQF93_RS27265 (GQF93_27255) | 43104..43316 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| GQF93_RS27270 (GQF93_27260) | 43349..43996 | + | 648 | WP_000953532.1 | Type IV secretion system protein virB1 | VF |
| GQF93_RS27275 (GQF93_27265) | 43974..44270 | + | 297 | WP_212487702.1 | TrbC/VirB2 family protein | - |
| GQF93_RS27280 (GQF93_27270) | 44289..47042 | + | 2754 | WP_001354552.1 | Type IV secretion system protein virB4 | VF |
| GQF93_RS27285 (GQF93_27275) | 47053..47256 | + | 204 | Protein_62 | pilus assembly protein | - |
| GQF93_RS27290 (GQF93_27280) | 47447..49024 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| GQF93_RS27295 (GQF93_27285) | 49334..49894 | + | 561 | WP_001161490.1 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|