MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP059835 Location: 2403115..2414789 Organism: Escherichia coli strain tcmA_3 Replicon: chromosome
Accession: NZ_CP059835 Location: 2403115..2414789 Organism: Escherichia coli strain tcmA_3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQF93_RS11690 (2399440) | 2399440..2400648 | - | 1209 | WP_001433585.1 | propionate kinase | - |
| GQF93_RS11695 (2400674) | 2400674..2402005 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| GQF93_RS11700 (2402027) | 2402027..2403016 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| GQF93_RS11705 (2403115) | 2403115..2404053 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| GQF93_RS11710 (2404368) | 2404368..2404586 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| GQF93_RS11715 (2404842) | 2404842..2405381 | + | 540 | WP_000675746.1 | protein YhaB | - |
| GQF93_RS11720 (2405403) | 2405403..2406590 | + | 1188 | WP_097432940.1 | YhaC family protein | - |
| GQF93_RS11730 (2407613) | 2407613..2408758 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| GQF93_RS11735 (2408855) | 2408855..2409745 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| GQF93_RS11740 (2409775) | 2409775..2410545 | - | 771 | WP_212487635.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| GQF93_RS11745 (2410561) | 2410561..2411895 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| GQF93_RS11750 (2412270) | 2412270..2413841 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| GQF93_RS11755 (2413990) | 2413990..2414325 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| GQF93_RS11760 (2414325) | 2414325..2414789 | + | 465 | WP_000347279.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| GQF93_RS11765 (2414844) | 2414844..2415653 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| GQF93_RS11770 (2415902) | 2415902..2417182 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| GQF93_RS11775 (2417205) | 2417205..2417678 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| GQF93_RS11780 (2417689) | 2417689..2418468 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| GQF93_RS11785 (2418458) | 2418458..2419336 | + | 879 | WP_001380079.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| GQF93_RS11790 (2419354) | 2419354..2419788 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|