MGE detailed information
MGE type: Genomic_island MGE length: 42263 bp
Accession: NZ_CP059319 Location: 961055..1003317 Organism: Rhizorhabdus wittichii strain MPO218 Replicon: chromosome
Accession: NZ_CP059319 Location: 961055..1003317 Organism: Rhizorhabdus wittichii strain MPO218 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRJ34_RS04640 (HRJ34_04645) | 957239..957454 | - | 216 | WP_086485633.1 | AlpA family phage regulatory protein | - |
| HRJ34_RS04645 (HRJ34_04650) | 957886..958161 | + | 276 | WP_086485632.1 | metal/formaldehyde-sensitive transcriptional repressor | - |
| HRJ34_RS04650 (HRJ34_04655) | 958158..958541 | + | 384 | Protein_925 | cation diffusion facilitator family transporter | - |
| HRJ34_RS04655 (HRJ34_04660) | 958630..959999 | + | 1370 | WP_150289884.1 | IS3 family transposase | - |
| HRJ34_RS04660 (HRJ34_04665) | 960135..961046 | + | 912 | WP_052648628.1 | ABC transporter permease | - |
| HRJ34_RS04665 (HRJ34_04670) | 961055..961831 | + | 777 | WP_226949045.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HRJ34_RS04670 (HRJ34_04675) | 961831..962766 | + | 936 | WP_037444199.1 | MlaD family protein | - |
| HRJ34_RS04675 (HRJ34_04680) | 962799..963392 | + | 594 | WP_020820686.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| HRJ34_RS04680 (HRJ34_04685) | 963389..963958 | - | 570 | WP_048575773.1 | HTH-type transcriptional regulator BetI | VF |
| HRJ34_RS04685 (HRJ34_04690) | 964020..964943 | + | 924 | WP_048575774.1 | alpha/beta fold hydrolase | - |
| HRJ34_RS04690 (HRJ34_04695) | 964927..965610 | + | 684 | WP_208633473.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| HRJ34_RS04695 (HRJ34_04700) | 965631..966521 | - | 891 | WP_048575776.1 | LysR family transcriptional regulator | - |
| HRJ34_RS04700 (HRJ34_04705) | 966619..967368 | + | 750 | WP_066516474.1 | sulfite exporter TauE/SafE family protein | - |
| HRJ34_RS04705 (HRJ34_04710) | 967701..968996 | + | 1296 | WP_066703033.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HRJ34_RS04710 (HRJ34_04715) | 969031..969915 | + | 885 | WP_208633474.1 | lipid kinase YegS | - |
| HRJ34_RS29430 | 971374..971502 | + | 129 | WP_264319420.1 | hypothetical protein | - |
| HRJ34_RS04720 (HRJ34_04725) | 971529..971951 | - | 423 | WP_021688160.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HRJ34_RS04725 (HRJ34_04730) | 971941..972192 | - | 252 | WP_030090526.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| HRJ34_RS04730 (HRJ34_04735) | 972310..972747 | - | 438 | WP_174391286.1 | hypothetical protein | - |
| HRJ34_RS04735 (HRJ34_04740) | 973033..973434 | - | 402 | WP_021688163.1 | hypothetical protein | - |
| HRJ34_RS04740 (HRJ34_04745) | 973513..974028 | - | 516 | WP_021688164.1 | hypothetical protein | - |
| HRJ34_RS04745 (HRJ34_04750) | 974104..974652 | - | 549 | WP_021688165.1 | hypothetical protein | - |
| HRJ34_RS04750 (HRJ34_04755) | 974649..974843 | - | 195 | WP_021688166.1 | hypothetical protein | - |
| HRJ34_RS04755 (HRJ34_04760) | 974872..975153 | - | 282 | WP_226949046.1 | hypothetical protein | - |
| HRJ34_RS04760 (HRJ34_04765) | 975125..975325 | - | 201 | WP_021688168.1 | hypothetical protein | - |
| HRJ34_RS04765 (HRJ34_04770) | 975322..975744 | - | 423 | WP_021688169.1 | hypothetical protein | - |
| HRJ34_RS04770 (HRJ34_04775) | 975828..976193 | - | 366 | WP_021688170.1 | DUF6283 family protein | - |
| HRJ34_RS04775 (HRJ34_04780) | 976190..976729 | - | 540 | WP_021688171.1 | hypothetical protein | - |
| HRJ34_RS04780 (HRJ34_04785) | 976995..977354 | - | 360 | WP_040714537.1 | hypothetical protein | - |
| HRJ34_RS04785 (HRJ34_04790) | 977399..977989 | - | 591 | WP_021688173.1 | DUF1419 domain-containing protein | - |
| HRJ34_RS04790 (HRJ34_04795) | 978062..979762 | - | 1701 | WP_021688174.1 | ATP-binding protein | - |
| HRJ34_RS04795 (HRJ34_04800) | 979907..980347 | - | 441 | WP_021688175.1 | hypothetical protein | - |
| HRJ34_RS04800 (HRJ34_04805) | 980350..980856 | - | 507 | WP_021688176.1 | hypothetical protein | - |
| HRJ34_RS04805 (HRJ34_04810) | 980853..982367 | - | 1515 | WP_226949047.1 | DUF3560 domain-containing protein | - |
| HRJ34_RS04810 (HRJ34_04815) | 982470..982664 | - | 195 | WP_021688178.1 | hypothetical protein | - |
| HRJ34_RS04815 (HRJ34_04820) | 982805..983179 | - | 375 | WP_047170220.1 | hypothetical protein | - |
| HRJ34_RS04820 (HRJ34_04825) | 983315..983794 | - | 480 | WP_021688180.1 | hypothetical protein | - |
| HRJ34_RS04825 (HRJ34_04830) | 983800..984555 | - | 756 | WP_021688181.1 | hypothetical protein | - |
| HRJ34_RS04830 (HRJ34_04835) | 984599..985060 | - | 462 | WP_021688182.1 | hypothetical protein | - |
| HRJ34_RS04835 (HRJ34_04840) | 985072..985719 | - | 648 | WP_021688183.1 | hypothetical protein | - |
| HRJ34_RS04840 (HRJ34_04845) | 985943..987163 | - | 1221 | WP_021688184.1 | hypothetical protein | - |
| HRJ34_RS04845 (HRJ34_04850) | 987591..987932 | - | 342 | WP_021688185.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| HRJ34_RS04850 (HRJ34_04855) | 988268..988795 | - | 528 | WP_030090520.1 | hypothetical protein | Toxin Detail |
| HRJ34_RS04855 (HRJ34_04860) | 988792..989037 | - | 246 | WP_021688187.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HRJ34_RS04860 (HRJ34_04865) | 989298..994469 | - | 5172 | WP_030090518.1 | lactate dehydrogenase | - |
| HRJ34_RS04865 (HRJ34_04870) | 994590..995828 | - | 1239 | WP_021688189.1 | hypothetical protein | - |
| HRJ34_RS29140 | 996083..996277 | + | 195 | WP_226949048.1 | hypothetical protein | - |
| HRJ34_RS04875 (HRJ34_04880) | 996377..996661 | - | 285 | WP_021688191.1 | hypothetical protein | - |
| HRJ34_RS04880 (HRJ34_04885) | 996658..996933 | - | 276 | WP_013846907.1 | hypothetical protein | - |
| HRJ34_RS04885 (HRJ34_04890) | 997046..997804 | - | 759 | WP_021688193.1 | PRTRC system ThiF family protein | - |
| HRJ34_RS04890 (HRJ34_04895) | 997794..998453 | - | 660 | WP_021688194.1 | PRTRC system protein A | - |
| HRJ34_RS04895 (HRJ34_04900) | 998450..999280 | - | 831 | WP_021688195.1 | PRTRC system protein B | - |
| HRJ34_RS04900 (HRJ34_04905) | 999289..1000236 | - | 948 | WP_021688196.1 | hypothetical protein | - |
| HRJ34_RS04910 (HRJ34_04915) | 1001938..1003317 | - | 1380 | WP_226949049.1 | hypothetical protein ; Integrase | Integrase |
| HRJ34_RS04915 (HRJ34_04920) | 1003724..1004725 | + | 1002 | WP_226949050.1 | threonine/serine dehydratase | - |
| HRJ34_RS04920 (HRJ34_04925) | 1004898..1005686 | + | 789 | WP_208633475.1 | FAD binding domain-containing protein | - |
| HRJ34_RS04925 (HRJ34_04930) | 1005680..1006147 | + | 468 | WP_016744416.1 | (2Fe-2S)-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|