MGE detailed information
MGE type: Prophage MGE length: 76936 bp
Accession: NZ_CP059288 Location: 3544133..3621068 Organism: Escherichia coli strain 1506 Replicon: chromosome
Accession: NZ_CP059288 Location: 3544133..3621068 Organism: Escherichia coli strain 1506 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0481_RS17160 () | 3539482..3540179 | + | 698 | Protein_3356 | IS1 family transposase | - |
| H0481_RS17165 () | 3540460..3541785 | + | 1326 | WP_001046307.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| H0481_RS17170 () | 3541894..3542130 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| H0481_RS17175 () | 3542142..3542735 | + | 594 | WP_063117844.1 | reactive chlorine species resistance protein RclC | - |
| H0481_RS17180 () | 3542894..3543022 | - | 129 | Protein_3360 | aldo/keto reductase | - |
| H0481_RS17185 () | 3543325..3544176 | + | 852 | WP_000621009.1 | helix-turn-helix domain-containing protein | - |
| H0481_RS17190 () | 3544300..3544997 | - | 698 | Protein_3362 | IS1 family transposase IS1S | Transposase |
| H0481_RS17195 () | 3545055..3545294 | + | 240 | Protein_3363 | Fimbria adhesin EcpD | VF |
| H0481_RS17200 () | 3545263..3545973 | + | 711 | WP_001350485.1 | putative fimbrial chaperone EcpE | VF |
| H0481_RS17205 () | 3546263..3547243 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| H0481_RS17210 () | 3547839..3548231 | - | 393 | WP_012599940.1 | DUF2570 domain-containing protein | - |
| H0481_RS17215 () | 3548215..3548691 | - | 477 | WP_021563578.1 | glycoside hydrolase family protein | - |
| H0481_RS17220 () | 3548695..3549030 | - | 336 | WP_001120502.1 | phage holin, lambda family | - |
| H0481_RS17225 () | 3549107..3550159 | - | 1053 | Protein_3369 | site-specific DNA-methyltransferase | - |
| H0481_RS17230 () | 3550310..3550513 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| H0481_RS17235 () | 3550833..3551852 | + | 1020 | WP_000357056.1 | hypothetical protein | - |
| H0481_RS17240 () | 3551867..3552247 | - | 381 | WP_080086273.1 | antitermination protein Q | - |
| H0481_RS17245 () | 3552262..3553251 | - | 990 | WP_023352842.1 | DUF968 domain-containing protein | - |
| H0481_RS17250 () | 3553259..3554068 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| H0481_RS17255 () | 3554088..3554477 | - | 390 | WP_022296585.1 | RusA family crossover junction endodeoxyribonuclease | - |
| H0481_RS17260 () | 3554474..3554800 | - | 327 | WP_000210137.1 | LexA family transcriptional regulator | - |
| H0481_RS17265 () | 3554797..3555450 | - | 654 | WP_181463883.1 | phage N-6-adenine-methyltransferase | - |
| H0481_RS17270 () | 3555450..3555944 | - | 495 | WP_021576994.1 | PerC family transcriptional regulator | - |
| H0481_RS17275 () | 3555941..3556882 | - | 942 | WP_000104972.1 | helix-turn-helix domain-containing protein | - |
| H0481_RS17280 () | 3556872..3557051 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| H0481_RS17285 () | 3557227..3557778 | - | 552 | WP_000515868.1 | hypothetical protein | - |
| H0481_RS17290 () | 3557822..3558022 | - | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| H0481_RS17295 () | 3558113..3558787 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| H0481_RS17300 () | 3559022..3559228 | + | 207 | WP_000549623.1 | hypothetical protein | - |
| H0481_RS17305 () | 3559200..3559634 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| H0481_RS17310 () | 3560179..3560715 | + | 537 | WP_089529722.1 | 5'-deoxynucleotidase | - |
| H0481_RS17315 () | 3560706..3561068 | + | 363 | WP_001242749.1 | phage protein | - |
| H0481_RS17320 () | 3561068..3561373 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| H0481_RS17325 () | 3561600..3562763 | + | 1164 | WP_000051887.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| H0481_RS17330 () | 3564960..3565442 | - | 483 | Protein_3390 | phage head protein | - |
| H0481_RS17335 () | 3565575..3565871 | + | 297 | WP_181464108.1 | Arc family DNA-binding protein | - |
| H0481_RS17340 () | 3565888..3566613 | - | 726 | WP_181463884.1 | hypothetical protein | - |
| H0481_RS17345 () | 3566702..3567370 | - | 669 | WP_181464109.1 | hypothetical protein | - |
| H0481_RS17350 () | 3567414..3567587 | - | 174 | WP_021518013.1 | hypothetical protein | - |
| H0481_RS17355 () | 3567687..3568328 | + | 642 | WP_001008290.1 | LexA family transcriptional regulator | - |
| H0481_RS17360 () | 3568389..3568688 | + | 300 | WP_022630937.1 | hypothetical protein | - |
| H0481_RS17365 () | 3568734..3570902 | - | 2169 | WP_059333508.1 | hypothetical protein | - |
| H0481_RS17370 () | 3570887..3572230 | - | 1344 | WP_181463885.1 | DNA transfer protein | - |
| H0481_RS17375 () | 3572241..3572933 | - | 693 | WP_000964864.1 | hypothetical protein | - |
| H0481_RS17380 () | 3572936..3573391 | - | 456 | WP_033555245.1 | DUF2824 family protein | - |
| H0481_RS17385 () | 3573391..3574239 | - | 849 | WP_181463886.1 | hypothetical protein | - |
| H0481_RS17390 () | 3574239..3575657 | - | 1419 | WP_181463887.1 | packaged DNA stabilization protein gp10 | - |
| H0481_RS17395 () | 3575667..3576128 | - | 462 | WP_001140510.1 | head DNA stabilization protein | - |
| H0481_RS17400 () | 3576109..3576297 | - | 189 | WP_001462613.1 | hypothetical protein | - |
| H0481_RS17405 () | 3576339..3577592 | - | 1254 | WP_181463888.1 | coat protein | - |
| H0481_RS17410 () | 3577611..3578504 | - | 894 | WP_181463889.1 | scaffolding protein | - |
| H0481_RS17415 () | 3578595..3580793 | - | 2199 | WP_021538737.1 | portal protein | - |
| H0481_RS17420 () | 3580795..3582210 | - | 1416 | WP_181463890.1 | PBSX family phage terminase large subunit | - |
| H0481_RS17425 () | 3582207..3582647 | - | 441 | WP_000113732.1 | hypothetical protein | - |
| H0481_RS17430 () | 3582650..3582892 | - | 243 | WP_094313065.1 | DUF2560 family protein | - |
| H0481_RS17435 () | 3583139..3583624 | - | 486 | WP_181463891.1 | GIY-YIG nuclease family protein | - |
| H0481_RS17440 () | 3583825..3583977 | - | 153 | WP_021527496.1 | hypothetical protein | - |
| H0481_RS17445 () | 3583965..3584432 | - | 468 | WP_181463892.1 | lysis protein | - |
| H0481_RS17450 () | 3584429..3584905 | - | 477 | WP_000229399.1 | glycoside hydrolase family protein | - |
| H0481_RS17455 () | 3584889..3585212 | - | 324 | WP_181463893.1 | phage holin, lambda family | - |
| H0481_RS17460 () | 3585646..3586269 | - | 624 | WP_112019360.1 | antitermination protein | - |
| H0481_RS17465 () | 3586266..3586454 | - | 189 | WP_000994516.1 | protein ninH | - |
| H0481_RS17470 () | 3586451..3586813 | - | 363 | WP_001008193.1 | RusA family crossover junction endodeoxyribonuclease | - |
| H0481_RS17475 () | 3586810..3587100 | - | 291 | WP_181463894.1 | DUF1364 domain-containing protein | - |
| H0481_RS17480 () | 3587100..3587822 | - | 723 | WP_001519597.1 | DNA-binding protein | - |
| H0481_RS17485 () | 3587815..3587985 | - | 171 | WP_000566866.1 | protein ninF | - |
| H0481_RS17490 () | 3587982..3588164 | - | 183 | WP_016063117.1 | NinE family protein | - |
| H0481_RS17495 () | 3588161..3588571 | - | 411 | WP_176252107.1 | recombination protein NinB | - |
| H0481_RS17500 () | 3588574..3588900 | - | 327 | WP_181463895.1 | hypothetical protein | - |
| H0481_RS17505 () | 3589009..3589215 | - | 207 | WP_000229811.1 | hypothetical protein | - |
| H0481_RS17510 () | 3589288..3590664 | - | 1377 | WP_181463896.1 | replicative DNA helicase | - |
| H0481_RS17515 () | 3590661..3591482 | - | 822 | WP_001608293.1 | replication protein | - |
| H0481_RS17520 () | 3591469..3591630 | - | 162 | WP_000166961.1 | hypothetical protein | - |
| H0481_RS17525 () | 3591663..3591959 | - | 297 | WP_000035948.1 | hypothetical protein | - |
| H0481_RS17530 () | 3592075..3592260 | - | 186 | WP_000276885.1 | Cro/Cl family transcriptional regulator | - |
| H0481_RS17535 () | 3592341..3592991 | + | 651 | WP_001095982.1 | LexA family transcriptional regulator | - |
| H0481_RS17540 () | 3593306..3593578 | + | 273 | WP_000256574.1 | hypothetical protein | - |
| H0481_RS17545 () | 3593582..3593806 | + | 225 | WP_001077327.1 | hypothetical protein | - |
| H0481_RS17550 () | 3593871..3594113 | + | 243 | WP_181463897.1 | hypothetical protein | - |
| H0481_RS17555 () | 3594332..3594502 | + | 171 | WP_001183771.1 | hypothetical protein | - |
| H0481_RS17560 () | 3594587..3594895 | + | 309 | WP_000604104.1 | hypothetical protein | - |
| H0481_RS17565 () | 3594892..3595803 | + | 912 | WP_181463898.1 | recombinase RecT | - |
| H0481_RS17570 () | 3595787..3596269 | + | 483 | WP_001580128.1 | siphovirus Gp157 family protein | - |
| H0481_RS17575 () | 3596281..3596595 | + | 315 | WP_000753555.1 | hypothetical protein | - |
| H0481_RS17580 () | 3596612..3596893 | + | 282 | WP_000773125.1 | hypothetical protein | - |
| H0481_RS17585 () | 3596890..3597054 | + | 165 | WP_001214446.1 | DUF2737 family protein | - |
| H0481_RS17590 () | 3597051..3597425 | + | 375 | WP_181463899.1 | hypothetical protein | - |
| H0481_RS17595 () | 3597422..3597679 | + | 258 | WP_089577457.1 | DUF4752 family protein | - |
| H0481_RS17600 () | 3597847..3598179 | + | 333 | Protein_3444 | helix-turn-helix domain-containing protein | - |
| H0481_RS17605 () | 3598071..3599231 | + | 1161 | WP_181463900.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H0481_RS17615 () | 3599436..3600689 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H0481_RS17620 () | 3600701..3601804 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H0481_RS17625 () | 3602092..3603147 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| H0481_RS17630 () | 3603186..3603587 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| H0481_RS17635 () | 3603645..3604889 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3604305..3604385 | - | 81 | NuclAT_12 | - | - |
| - () | 3604305..3604385 | - | 81 | NuclAT_12 | - | - |
| - () | 3604305..3604385 | - | 81 | NuclAT_12 | - | - |
| - () | 3604305..3604385 | - | 81 | NuclAT_12 | - | - |
| H0481_RS17640 () | 3604981..3605439 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| H0481_RS17645 () | 3605700..3607157 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| H0481_RS17650 () | 3607214..3607735 | - | 522 | Protein_3453 | peptide chain release factor H | - |
| H0481_RS17655 () | 3607734..3607937 | - | 204 | Protein_3454 | RNA ligase RtcB family protein | - |
| H0481_RS17660 () | 3608273..3608970 | + | 698 | Protein_3455 | IS1 family transposase IS1X2 | Transposase |
| H0481_RS17665 () | 3608981..3609412 | - | 432 | WP_181463901.1 | GNAT family N-acetyltransferase | - |
| H0481_RS17670 () | 3609422..3609820 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H0481_RS17675 () | 3609823..3610116 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H0481_RS17680 () | 3610168..3611220 | - | 1053 | WP_000691315.1 | DNA polymerase IV | - |
| H0481_RS17685 () | 3611282..3612826 | + | 1545 | WP_181463902.1 | hypothetical protein ; Integrase | Integrase |
| H0481_RS17695 () | 3614379..3615087 | + | 709 | Protein_3462 | hypothetical protein | - |
| H0481_RS17700 () | 3615091..3615663 | - | 573 | WP_000086540.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H0481_RS17705 () | 3616117..3616814 | - | 698 | Protein_3464 | IS1 family transposase IS1X2 | Transposase |
| H0481_RS17710 () | 3616916..3617767 | + | 852 | WP_000922499.1 | FliM/FliN family flagellar motor switch protein | - |
| H0481_RS17715 () | 3617760..3618131 | + | 372 | WP_000043127.1 | Flagellar motor switch protein FliN | VF |
| H0481_RS17720 () | 3618128..3618880 | + | 753 | WP_000830273.1 | Flagellar biosynthetic protein FliP | VF |
| H0481_RS17725 () | 3618883..3619155 | + | 273 | WP_000958542.1 | hypothetical protein | VF |
| H0481_RS17730 () | 3619157..3619939 | + | 783 | WP_001260503.1 | Surface presentation of antigens protein SpaR | VF |
| H0481_RS17735 () | 3619929..3621068 | + | 1140 | WP_000785661.1 | Flagellar biosynthetic protein FlhB | VF |
| H0481_RS17740 () | 3621052..3623145 | + | 2094 | WP_181463903.1 | flagellar biosynthesis protein FlhA | - |
| H0481_RS17745 () | 3623369..3623866 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| H0481_RS17750 () | 3624042..3624815 | - | 774 | WP_181463904.1 | C40 family peptidase | - |
| H0481_RS17755 () | 3625001..3625261 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| H0481_RS17760 () | 3625264..3625533 | + | 270 | Protein_3475 | type II toxin-antitoxin system YafQ family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|