MGE detailed information
MGE type: Conjugative plasmid MGE length: 141169 bp
Accession: NZ_CP059280 Location: 1..141169 Organism: Escherichia coli strain C7 Replicon: plasmid pC7
Accession: NZ_CP059280 Location: 1..141169 Organism: Escherichia coli strain C7 Replicon: plasmid pC7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0271_RS24085 () | 415..1581 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| H0271_RS24090 () | 1581..2552 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H0271_RS24095 () | 3419..4321 | + | 903 | WP_077727434.1 | DUF1281 domain-containing protein | - |
| H0271_RS24100 () | 4325..4629 | + | 305 | Protein_3 | hypothetical protein | - |
| H0271_RS24105 () | 4706..5389 | + | 684 | WP_000086185.1 | DNA methylase | - |
| H0271_RS24110 () | 5390..5611 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| H0271_RS24115 () | 5625..6059 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| H0271_RS24120 () | 6110..6886 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| H0271_RS24125 () | 6963..8075 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| H0271_RS24130 () | 8775..9077 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| H0271_RS24135 () | 9124..9546 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| H0271_RS24140 () | 9543..9734 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| H0271_RS24145 () | 10007..10255 | - | 249 | WP_071556315.1 | hypothetical protein | - |
| H0271_RS24150 () | 10769..10999 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| H0271_RS24155 () | 11051..12412 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| H0271_RS24160 () | 12460..13023 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| H0271_RS24165 () | 13049..13261 | + | 213 | WP_001348622.1 | hypothetical protein | - |
| H0271_RS24170 () | 13424..13759 | + | 336 | WP_013023883.1 | hypothetical protein | - |
| H0271_RS24175 () | 14556..16457 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| H0271_RS24180 () | 16607..17104 | + | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| H0271_RS24185 () | 17167..17400 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| H0271_RS24190 () | 17466..19424 | + | 1959 | WP_042045562.1 | ParB/RepB/Spo0J family partition protein | - |
| H0271_RS24195 () | 19479..19913 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| H0271_RS24200 () | 19910..20629 | + | 720 | WP_033550421.1 | plasmid SOS inhibition protein A | - |
| - () | 20641..20743 | + | 103 | NuclAT_1 | - | - |
| - () | 20641..20743 | + | 103 | NuclAT_1 | - | - |
| - () | 20641..20743 | + | 103 | NuclAT_1 | - | - |
| - () | 20641..20743 | + | 103 | NuclAT_1 | - | - |
| H0271_RS24205 () | 20789..22158 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| - () | 22185..22312 | + | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22185..22312 | + | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22185..22312 | + | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22185..22312 | + | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22245..22310 | - | 66 | - | - | Antitoxin Detail |
| H0271_RS24210 () | 22356..22514 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| H0271_RS24215 () | 22957..23292 | + | 336 | WP_013023876.1 | hypothetical protein | - |
| H0271_RS24220 () | 23205..23411 | + | 207 | WP_000275859.1 | hypothetical protein | - |
| H0271_RS24225 () | 23436..23723 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| H0271_RS24230 () | 23842..24663 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| H0271_RS24235 () | 24960..25562 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| H0271_RS24240 () | 25892..26275 | + | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| H0271_RS24245 () | 26409..27086 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| H0271_RS24250 () | 27174..27401 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| H0271_RS24255 () | 27435..27794 | + | 360 | WP_024210418.1 | type IV conjugative transfer system pilin TraA | - |
| H0271_RS24260 () | 27809..28120 | + | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| H0271_RS24265 () | 28142..28708 | + | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| H0271_RS24270 () | 28719..29423 | + | 705 | WP_148725207.1 | type-F conjugative transfer system secretin TraK | - |
| H0271_RS24275 () | 29423..30874 | + | 1452 | WP_000146687.1 | conjugal transfer protein TraB | - |
| H0271_RS24280 () | 30843..31430 | + | 588 | WP_071587349.1 | conjugal transfer protein TraP | - |
| H0271_RS24285 () | 31369..31728 | + | 360 | WP_001617876.1 | conjugal transfer protein TrbD | - |
| H0271_RS24290 () | 31728..32243 | + | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| H0271_RS24295 () | 32378..32599 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| H0271_RS24300 () | 32759..35386 | + | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| H0271_RS24305 () | 35383..35769 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| H0271_RS24310 () | 35766..36398 | + | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| H0271_RS24315 () | 36395..37387 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| H0271_RS24320 () | 37417..37722 | + | 306 | WP_000224413.1 | hypothetical protein | - |
| H0271_RS24325 () | 37731..38369 | + | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| H0271_RS24330 () | 38366..40216 | + | 1851 | WP_000821866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| H0271_RS24335 () | 40243..40467 | + | 225 | WP_181464338.1 | conjugal transfer protein TrbE | - |
| H0271_RS24340 () | 40518..41215 | + | 698 | Protein_51 | IS1 family transposase IS1G | Transposase |
| H0271_RS24345 () | 41263..41583 | + | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| H0271_RS24350 () | 41710..41994 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| H0271_RS24355 () | 41981..42526 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| H0271_RS24360 () | 42456..42803 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| H0271_RS24365 () | 42751..43176 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| H0271_RS24370 () | 43163..44536 | + | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| H0271_RS24375 () | 44533..47352 | + | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| H0271_RS24380 () | 47428..48125 | - | 698 | Protein_59 | IS1 family transposase IS1G | Transposase |
| H0271_RS24385 () | 48175..48645 | + | 471 | WP_181464339.1 | entry exclusion protein | - |
| H0271_RS24390 () | 48677..49408 | + | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| H0271_RS24395 () | 49611..50390 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| H0271_RS24400 () | 50387..52585 | + | 2199 | WP_024623315.1 | type IV conjugative transfer system coupling protein TraD | - |
| H0271_RS24405 () | 52585..57855 | + | 5271 | WP_042045338.1 | Multifunctional conjugation protein TraI | Relaxase |
| H0271_RS24410 () | 57875..58621 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| H0271_RS24415 () | 58676..59236 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| H0271_RS24420 () | 59367..59579 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| H0271_RS24425 () | 60092..60378 | + | 287 | Protein_68 | DUF2726 domain-containing protein | - |
| - () | 60345..60405 | - | 61 | NuclAT_2 | - | - |
| - () | 60345..60405 | - | 61 | NuclAT_2 | - | - |
| - () | 60345..60405 | - | 61 | NuclAT_2 | - | - |
| - () | 60345..60405 | - | 61 | NuclAT_2 | - | - |
| H0271_RS24430 () | 60450..60584 | + | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | - |
| H0271_RS24435 () | 60881..60955 | + | 75 | WP_108401337.1 | hypothetical protein | - |
| H0271_RS24440 () | 61013..61759 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| H0271_RS24445 () | 61774..63315 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| H0271_RS24450 () | 63506..63721 | + | 216 | Protein_73 | replication regulatory protein RepA | - |
| H0271_RS24455 () | 63958..64032 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| H0271_RS24460 () | 64025..64882 | + | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| H0271_RS24465 () | 65822..66475 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H0271_RS24470 () | 66568..66825 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H0271_RS24475 () | 66758..67159 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H0271_RS24480 () | 67408..67823 | + | 416 | Protein_79 | IS1 family transposase IS1R | Transposase |
| H0271_RS24485 () | 67859..68404 | - | 546 | Protein_80 | Tn3 family transposase TnpA_Tn3 | Transposase |
| H0271_RS24490 () | 68470..69174 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H0271_RS24495 () | 69186..70667 | - | 1482 | WP_024210412.1 | IS91 family transposase ISVsa3 | Transposase |
| H0271_RS24500 () | 70894..71235 | - | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| H0271_RS24505 () | 71196..71645 | - | 450 | WP_073518795.1 | hypothetical protein | - |
| H0271_RS24510 () | 72160..72330 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| H0271_RS24515 () | 72275..73012 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| H0271_RS24520 () | 73138..73233 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| H0271_RS24525 () | 73368..74072 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H0271_RS24530 () | 74194..75108 | + | 915 | WP_023063803.1 | hypothetical protein | ARG |
| H0271_RS24535 () | 75105..76343 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| H0271_RS24540 () | 76343..76927 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| H0271_RS24545 () | 77420..78184 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| H0271_RS24550 () | 78302..78367 | - | 66 | Protein_93 | EAL domain-containing protein | - |
| H0271_RS24555 () | 78411..78716 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| H0271_RS24560 () | 78727..79932 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| H0271_RS24565 () | 80088..80291 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| H0271_RS24570 () | 80419..81258 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| H0271_RS24575 () | 81252..81596 | - | 345 | WP_181464340.1 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| H0271_RS24580 () | 81606..82310 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| H0271_RS24585 () | 82375..82920 | - | 546 | Protein_100 | IS91 family transposase ISAzo26 | Transposase |
| H0271_RS24590 () | 83078..83551 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| H0271_RS24595 () | 83682..84470 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| H0271_RS24600 () | 84793..85497 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| H0271_RS24605 () | 85547..85765 | - | 219 | Protein_104 | IS4 family transposase | - |
| H0271_RS24610 () | 85780..86477 | - | 698 | Protein_105 | IS1 family transposase IS1R | Transposase |
| H0271_RS24615 () | 86940..87098 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| H0271_RS24620 () | 87088..87594 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| H0271_RS24625 () | 87777..88592 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| H0271_RS24630 () | 88939..90825 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| H0271_RS24635 () | 90866..91393 | + | 528 | WP_000178050.1 | iron transporter | - |
| H0271_RS24640 () | 91497..92876 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| H0271_RS24645 () | 92879..94162 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| H0271_RS24650 () | 94152..95282 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| H0271_RS24655 () | 95287..95982 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| H0271_RS24660 () | 95969..96454 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| H0271_RS24665 () | 96479..96964 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| H0271_RS24670 () | 97086..97719 | + | 634 | Protein_117 | histidine-type phosphatase | - |
| H0271_RS24675 () | 97869..98042 | - | 174 | Protein_118 | IS5 family transposase ISKpn26 | Transposase |
| H0271_RS24680 () | 98043..98357 | - | 315 | Protein_119 | IS5 family transposase ISKpn26 | Transposase |
| H0271_RS24685 () | 99030..99769 | - | 740 | Protein_120 | IS3 family transposase IS629 | Transposase |
| H0271_RS24690 () | 99871..100131 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| H0271_RS24695 () | 100128..100637 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| H0271_RS24700 () | 100657..101004 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| H0271_RS24705 () | 101133..101468 | + | 336 | WP_001080732.1 | colicin transporter | - |
| H0271_RS24710 () | 103041..103588 | + | 548 | Protein_125 | replication initiation protein | - |
| H0271_RS24715 () | 103920..104795 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| H0271_RS24720 () | 104803..105579 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| H0271_RS24725 () | 105748..108009 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| H0271_RS24730 () | 108078..109253 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| H0271_RS24735 () | 109776..110081 | - | 306 | Protein_130 | IS91 family transposase ISSbo1 | Transposase |
| H0271_RS24740 () | 110107..110846 | + | 740 | Protein_131 | IS3 family transposase IS629 | Transposase |
| H0271_RS24745 () | 111519..113027 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| H0271_RS24750 () | 113117..113500 | + | 384 | Protein_133 | IS3 family transposase IS629 | Transposase |
| H0271_RS24755 () | 113529..113933 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| H0271_RS24760 () | 113930..114277 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| H0271_RS24765 () | 114326..115271 | + | 946 | Protein_136 | IS66 family transposase ISEc8 | Transposase |
| H0271_RS24770 () | 115357..116379 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| H0271_RS24775 () | 116379..117158 | + | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| H0271_RS24780 () | 117226..117834 | + | 609 | Protein_139 | IS66 family transposase ISEc22 | Transposase |
| H0271_RS24785 () | 117929..119542 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| H0271_RS24790 () | 119573..119923 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| H0271_RS24795 () | 119920..120345 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| H0271_RS24800 () | 120437..121228 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| H0271_RS24805 () | 121235..123205 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| H0271_RS24810 () | 123487..123923 | + | 437 | Protein_145 | IS3 family transposase IS2 | Transposase |
| H0271_RS24815 () | 124448..124720 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| H0271_RS24820 () | 125166..125341 | + | 176 | Protein_147 | IS3 family transposase | - |
| H0271_RS24825 () | 125567..126736 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| H0271_RS24830 () | 127103..127291 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| H0271_RS24835 () | 127412..128152 | + | 741 | WP_033550837.1 | tyrosine-type recombinase/integrase | - |
| H0271_RS24840 () | 128437..129414 | - | 978 | WP_033550836.1 | RepB family plasmid replication initiator protein | - |
| H0271_RS24845 () | 130254..130895 | - | 642 | WP_033550835.1 | hypothetical protein | - |
| H0271_RS24850 () | 133011..133301 | + | 291 | WP_000538310.1 | hypothetical protein | - |
| H0271_RS24855 () | 133291..134190 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| H0271_RS24860 () | 134240..136465 | - | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| H0271_RS24865 () | 136467..137555 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| H0271_RS24870 () | 138135..138353 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| H0271_RS24875 () | 138355..138660 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| H0271_RS24880 () | 138661..139467 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| H0271_RS24885 () | 140241..140996 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|