MGE detailed information
MGE type: Genomic_island MGE length: 48157 bp
Accession: NZ_CP059130 Location: 1073302..1121458 Organism: Escherichia coli strain Ec55 Replicon: chromosome
Accession: NZ_CP059130 Location: 1073302..1121458 Organism: Escherichia coli strain Ec55 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0X92_RS05090 (1069567) | 1069567..1070670 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H0X92_RS05095 (1070682) | 1070682..1071935 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H0X92_RS05105 (1072140) | 1072140..1072343 | - | 204 | Protein_998 | integrase | - |
| H0X92_RS05110 (1072489) | 1072489..1072959 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| H0X92_RS05115 (1072937) | 1072937..1073095 | - | 159 | WP_071550417.1 | ash family protein | - |
| H0X92_RS05120 (1073302) | 1073302..1074549 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| H0X92_RS05125 (1074539) | 1074539..1076176 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| H0X92_RS05130 (1076170) | 1076170..1079268 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| H0X92_RS05135 (1079552) | 1079552..1080334 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| H0X92_RS05140 (1080321) | 1080321..1081241 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| H0X92_RS26510 (1081406) | 1081406..1082182 | - | 777 | WP_000171155.1 | Prophage integrase IntA ; Integrase | Integrase |
| H0X92_RS26515 (1082390) | 1082390..1082725 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| H0X92_RS05150 (1082952) | 1082952..1083110 | - | 159 | Protein_1008 | integrase | - |
| H0X92_RS05155 (1083159) | 1083159..1083344 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| H0X92_RS05160 (1083559) | 1083559..1084173 | + | 615 | WP_001019923.1 | YagU family protein | - |
| H0X92_RS05165 (1084244) | 1084244..1084410 | + | 167 | Protein_1011 | tail fiber assembly protein | - |
| H0X92_RS05170 (1084422) | 1084422..1084751 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| H0X92_RS05175 (1085058) | 1085058..1085768 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| H0X92_RS05180 (1085737) | 1085737..1087380 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| H0X92_RS05185 (1087370) | 1087370..1089895 | - | 2526 | WP_001131109.1 | hypothetical protein | VF |
| H0X92_RS05190 (1089921) | 1089921..1090589 | - | 669 | WP_000716404.1 | hypothetical protein | VF |
| H0X92_RS05195 (1090646) | 1090646..1091233 | - | 588 | WP_000730982.1 | hypothetical protein | VF |
| H0X92_RS05200 (1091308) | 1091308..1091850 | - | 543 | WP_000389022.1 | hypothetical protein | VF |
| H0X92_RS05205 (1092674) | 1092674..1092864 | + | 191 | Protein_1019 | hypothetical protein | - |
| H0X92_RS05210 (1092934) | 1092934..1093074 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| H0X92_RS05215 (1093074) | 1093074..1093337 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| H0X92_RS05220 (1093702) | 1093702..1093803 | - | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| H0X92_RS05225 (1094276) | 1094276..1095418 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| H0X92_RS05230 (1095591) | 1095591..1096511 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| H0X92_RS05235 (1096668) | 1096668..1097594 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator ArgP | VF |
| H0X92_RS05240 (1097794) | 1097794..1098687 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator ArgP | VF |
| H0X92_RS05245 (1098718) | 1098718..1099707 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| H0X92_RS05250 (1099734) | 1099734..1100585 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| H0X92_RS05255 (1101151) | 1101151..1105398 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| H0X92_RS05260 (1105523) | 1105523..1106380 | - | 858 | WP_000620995.1 | HTH-type transcriptional activator RhaR | VF |
| H0X92_RS05265 (1106628) | 1106628..1107497 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| H0X92_RS05270 (1107657) | 1107657..1108250 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| H0X92_RS05275 (1108262) | 1108262..1108498 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| H0X92_RS05280 (1108607) | 1108607..1109932 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| H0X92_RS05285 (1110159) | 1110159..1111013 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| H0X92_RS05290 (1111539) | 1111539..1112258 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| H0X92_RS05295 (1112269) | 1112269..1113696 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| H0X92_RS05300 (1113689) | 1113689..1114384 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| H0X92_RS05305 (1114627) | 1114627..1115295 | - | 669 | WP_001005267.1 | protein YkgH | - |
| H0X92_RS05310 (1115479) | 1115479..1116699 | - | 1221 | WP_152770446.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| H0X92_RS05315 (1116694) | 1116694..1117770 | - | 1077 | Protein_1041 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| H0X92_RS05320 (1117812) | 1117812..1118573 | - | 762 | WP_001213045.1 | protein HyxA | - |
| H0X92_RS05325 (1118727) | 1118727..1119521 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| H0X92_RS05330 (1119851) | 1119851..1120414 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| H0X92_RS05335 (1121500) | 1121500..1123170 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| H0X92_RS05340 (1123184) | 1123184..1124656 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| H0X92_RS05345 (1124670) | 1124670..1125257 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|