MGE detailed information
MGE type: Genomic_island MGE length: 14146 bp
Accession: NZ_CP059119 Location: 2440676..2454821 Organism: Escherichia coli strain Ec42 Replicon: chromosome
Accession: NZ_CP059119 Location: 2440676..2454821 Organism: Escherichia coli strain Ec42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0X94_RS11805 (2440676) | 2440676..2440942 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| H0X94_RS11810 (2440942) | 2440942..2442264 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| H0X94_RS11815 (2442576) | 2442576..2442784 | + | 209 | Protein_2322 | AraC family transcriptional regulator | - |
| H0X94_RS11820 (2443039) | 2443039..2444265 | + | 1227 | Protein_2323 | Outer membrane usher protein FimD | VF |
| H0X94_RS11825 (2444279) | 2444279..2444599 | + | 321 | Protein_2324 | Protein FimF | VF |
| H0X94_RS11830 (2444690) | 2444690..2445918 | + | 1229 | WP_113708090.1 | IS3 family transposase IS2 | Transposase |
| H0X94_RS11835 (2445930) | 2445930..2446145 | + | 216 | Protein_2326 | Protein FimF | VF |
| H0X94_RS11840 (2446158) | 2446158..2446661 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| H0X94_RS11845 (2446720) | 2446720..2447634 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| H0X94_RS11850 (2447968) | 2447968..2450247 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| H0X94_RS11855 (2450495) | 2450495..2450692 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| H0X94_RS11860 (2450767) | 2450767..2451528 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| H0X94_RS11865 (2451930) | 2451930..2453612 | + | 1683 | WP_001295684.1 | sulfatase | - |
| H0X94_RS11870 (2453664) | 2453664..2454821 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| H0X94_RS11875 (2454787) | 2454787..2454909 | - | 123 | WP_120795387.1 | protein YneP | - |
| H0X94_RS11880 (2455112) | 2455112..2456797 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| H0X94_RS11885 (2456835) | 2456835..2459207 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |