MGE detailed information
MGE type: Genomic_island MGE length: 79704 bp
Accession: NZ_CP059119 Location: 1872812..1952515 Organism: Escherichia coli strain Ec42 Replicon: chromosome
Accession: NZ_CP059119 Location: 1872812..1952515 Organism: Escherichia coli strain Ec42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0X94_RS08990 (1868961) | 1868961..1869434 | + | 474 | WP_001105385.1 | DNA gyrase inhibitor SbmC | - |
| H0X94_RS08995 (1869633) | 1869633..1870691 | + | 1059 | WP_001200892.1 | FUSC family protein | - |
| H0X94_RS09000 (1870863) | 1870863..1871192 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| H0X94_RS25725 (1871293) | 1871293..1871658 | - | 366 | WP_001282181.1 | EutP/PduV family microcompartment system protein | - |
| H0X94_RS09010 (1871929) | 1871929..1872318 | - | 390 | WP_001445118.1 | IS110 family transposase | - |
| H0X94_RS25730 (1872507) | 1872507..1872731 | - | 225 | Protein_1770 | transposase | - |
| H0X94_RS09015 (1872812) | 1872812..1873216 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| H0X94_RS09020 (1873213) | 1873213..1873560 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| H0X94_RS09025 (1873609) | 1873609..1875148 | + | 1540 | Protein_1773 | IS66 family transposase ISEc22 | Transposase |
| H0X94_RS09030 (1875579) | 1875579..1875659 | - | 81 | Protein_1774 | hypothetical protein | - |
| H0X94_RS09035 (1875759) | 1875759..1875907 | - | 149 | Protein_1775 | DUF5983 family protein | - |
| H0X94_RS09040 (1875904) | 1875904..1876281 | - | 378 | WP_000854761.1 | TA system toxin CbtA family protein | Toxin Detail |
| H0X94_RS09045 (1876371) | 1876371..1876739 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| H0X94_RS09050 (1876902) | 1876902..1877123 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| H0X94_RS09055 (1877186) | 1877186..1877662 | - | 477 | WP_069067731.1 | RadC family protein | - |
| H0X94_RS09060 (1877677) | 1877677..1878150 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| H0X94_RS09065 (1878492) | 1878492..1878914 | - | 423 | Protein_1781 | DUF945 domain-containing protein | - |
| H0X94_RS09070 (1879001) | 1879001..1879747 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| H0X94_RS09075 (1879762) | 1879762..1881303 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| H0X94_RS09080 (1881496) | 1881496..1881897 | - | 402 | Protein_1784 | DUF945 domain-containing protein | - |
| H0X94_RS09085 (1882015) | 1882015..1882210 | - | 196 | Protein_1785 | DUF905 family protein | - |
| H0X94_RS09090 (1882281) | 1882281..1885127 | - | 2847 | WP_219334553.1 | Ag43/Cah family autotransporter adhesin | - |
| H0X94_RS09095 (1885499) | 1885499..1886371 | - | 873 | WP_001352361.1 | GTPase family protein | - |
| H0X94_RS09100 (1886456) | 1886456..1887373 | - | 918 | WP_000250235.1 | hypothetical protein | - |
| H0X94_RS09110 (1889350) | 1889350..1889952 | - | 603 | WP_000813456.1 | hypothetical protein | - |
| H0X94_RS09115 (1890047) | 1890047..1890253 | - | 207 | WP_000235225.1 | AlpA family transcriptional regulator | - |
| H0X94_RS09120 (1890394) | 1890394..1890660 | + | 267 | WP_000840364.1 | hypothetical protein | - |
| H0X94_RS09125 (1891012) | 1891012..1891137 | + | 126 | Protein_1793 | hemolysin activation protein | - |
| H0X94_RS25735 (1891483) | 1891483..1891683 | - | 201 | WP_001297219.1 | hypothetical protein | - |
| H0X94_RS09130 (1891882) | 1891882..1892451 | + | 570 | WP_000221554.1 | inovirus Gp2 family protein | - |
| H0X94_RS09135 (1892617) | 1892617..1893009 | + | 393 | WP_001352248.1 | putative zinc ribbon protein | - |
| H0X94_RS09140 (1893019) | 1893019..1893987 | - | 969 | Protein_1797 | IS110 family transposase | - |
| H0X94_RS09145 (1894172) | 1894172..1894576 | + | 405 | WP_001221631.1 | zinc-ribbon domain-containing protein | - |
| H0X94_RS09150 (1894867) | 1894867..1895529 | + | 663 | Protein_1799 | ISL3 family transposase | - |
| H0X94_RS09155 (1895593) | 1895593..1895853 | + | 261 | Protein_1800 | IS3 family transposase ISSfl10 | Transposase |
| H0X94_RS09160 (1895863) | 1895863..1897014 | - | 1152 | WP_024176387.1 | IS30 family transposase IS30D | Transposase |
| H0X94_RS09165 (1897082) | 1897082..1897327 | - | 246 | Protein_1802 | IS3 family transposase ISEhe3 | Transposase |
| H0X94_RS09170 (1897751) | 1897751..1897915 | + | 165 | WP_219334554.1 | hypothetical protein | - |
| H0X94_RS25740 (1897888) | 1897888..1898076 | + | 189 | Protein_1804 | IS4 family transposase | - |
| H0X94_RS25745 (1898055) | 1898055..1898228 | + | 174 | Protein_1805 | cobalamin biosynthesis protein | - |
| H0X94_RS09175 (1898380) | 1898380..1898925 | + | 546 | WP_000973197.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| H0X94_RS09180 (1898922) | 1898922..1899665 | + | 744 | WP_001352249.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| H0X94_RS09185 (1899677) | 1899677..1900756 | + | 1080 | WP_001166154.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| H0X94_RS09190 (1900818) | 1900818..1901753 | + | 936 | WP_000986349.1 | L,D-transpeptidase | - |
| H0X94_RS09200 (1902211) | 1902211..1903128 | + | 918 | WP_001011462.1 | nitrogen assimilation transcriptional regulator NAC | - |
| H0X94_RS09205 (1903230) | 1903230..1904180 | + | 951 | WP_001011023.1 | HTH-type transcriptional regulator Cbl | - |
| H0X94_RS09215 (1904298) | 1904298..1905941 | + | 1644 | Protein_1812 | toxic metabolite efflux MATE transporter YeeO | - |
| H0X94_RS09225 (1906445) | 1906445..1907142 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| H0X94_RS09230 (1907348) | 1907348..1908064 | - | 717 | WP_000532923.1 | putative transcriptional regulatory protein YeeN | VF |
| H0X94_RS09235 (1908407) | 1908407..1909861 | - | 1455 | WP_001060229.1 | AMP nucleosidase | - |
| H0X94_RS09240 (1909963) | 1909963..1911279 | - | 1317 | WP_000378546.1 | shikimate transporter | - |
| H0X94_RS09245 (1911594) | 1911594..1912646 | + | 1053 | WP_069067659.1 | glycosyltransferase family 9 protein | - |
| H0X94_RS09250 (1912908) | 1912908..1919984 | - | 7077 | WP_044064301.1 | inverse autotransporter adhesin YeeJ | - |
| H0X94_RS09255 (1920539) | 1920539..1922665 | - | 2127 | WP_023303963.1 | CHAT domain-containing protein | - |
| H0X94_RS09260 (1923892) | 1923892..1925676 | + | 1785 | WP_121887059.1 | AAA family ATPase | - |
| H0X94_RS09265 (1925663) | 1925663..1927480 | + | 1818 | WP_021575213.1 | ATP-dependent helicase | - |
| H0X94_RS09270 (1927912) | 1927912..1928616 | - | 705 | WP_021575210.1 | hypothetical protein | - |
| H0X94_RS09275 (1929473) | 1929473..1931452 | - | 1980 | WP_021575209.1 | hypothetical protein | - |
| H0X94_RS09280 (1931449) | 1931449..1931955 | - | 507 | WP_021575208.1 | hypothetical protein | - |
| H0X94_RS09285 (1932106) | 1932106..1933230 | - | 1125 | WP_257623300.1 | putative lipase | - |
| H0X94_RS09290 (1933586) | 1933586..1934530 | + | 945 | WP_023303961.1 | zincin-like metallopeptidase domain-containing protein | - |
| H0X94_RS09295 (1934724) | 1934724..1935470 | - | 747 | WP_021575205.1 | MobC family replication-relaxation protein | - |
| H0X94_RS09300 (1935480) | 1935480..1937339 | - | 1860 | WP_021575204.1 | type IV secretion system DNA-binding domain-containing protein | - |
| H0X94_RS09305 (1938049) | 1938049..1938354 | - | 306 | WP_000606541.1 | hypothetical protein | - |
| H0X94_RS09310 (1938388) | 1938388..1938693 | - | 306 | WP_000754361.1 | hypothetical protein | - |
| H0X94_RS09315 (1938729) | 1938729..1939127 | - | 399 | WP_000592251.1 | cag pathogenicity island Cag12 family protein | - |
| H0X94_RS09320 (1939124) | 1939124..1940149 | - | 1026 | WP_000125558.1 | Type IV secretion system protein VirB11 | VF |
| H0X94_RS09325 (1940139) | 1940139..1941389 | - | 1251 | WP_000997454.1 | Type IV secretion system protein virB10 | VF |
| H0X94_RS09330 (1941433) | 1941433..1942341 | - | 909 | WP_219334555.1 | Type IV secretion system protein virB9 | VF |
| H0X94_RS09335 (1942338) | 1942338..1943021 | - | 684 | WP_000003229.1 | Type IV secretion system protein PtlE | VF |
| H0X94_RS09340 (1943014) | 1943014..1943151 | - | 138 | WP_000825479.1 | hypothetical protein | - |
| H0X94_RS09345 (1943243) | 1943243..1944316 | - | 1074 | WP_001593439.1 | type IV secretion system protein | - |
| H0X94_RS09350 (1944320) | 1944320..1944562 | - | 243 | WP_001593437.1 | EexN family lipoprotein | - |
| H0X94_RS09355 (1944570) | 1944570..1945277 | - | 708 | WP_000857358.1 | type IV secretion system protein | - |
| H0X94_RS09360 (1945295) | 1945295..1948033 | - | 2739 | WP_038434405.1 | Type IV secretion system protein virB4 | VF |
| H0X94_RS09365 (1948046) | 1948046..1948339 | - | 294 | WP_000600171.1 | Type IV secretion system protein PtlA | VF |
| H0X94_RS09370 (1948339) | 1948339..1949049 | - | 711 | WP_001593436.1 | Type IV secretion system protein virB1 | VF |
| H0X94_RS09375 (1949122) | 1949122..1949355 | - | 234 | WP_001231171.1 | hypothetical protein | - |
| H0X94_RS09380 (1949924) | 1949924..1950052 | - | 129 | WP_000391564.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| H0X94_RS09385 (1950295) | 1950295..1950504 | - | 210 | WP_001112403.1 | TraR/DksA family transcriptional regulator | - |
| H0X94_RS09390 (1950494) | 1950494..1951075 | - | 582 | WP_000937857.1 | DUF2857 domain-containing protein | - |
| H0X94_RS09395 (1951060) | 1951060..1951242 | - | 183 | WP_001513329.1 | hypothetical protein | - |
| H0X94_RS09400 (1951264) | 1951264..1951449 | - | 186 | WP_000205185.1 | AlpA family transcriptional regulator | - |
| H0X94_RS09405 (1951589) | 1951589..1952515 | - | 927 | WP_000039782.1 | hypothetical protein | - |
| H0X94_RS09410 (1953387) | 1953387..1955408 | - | 2022 | WP_000784549.1 | siderophore yersiniabactin receptor FyuA | - |
| H0X94_RS09415 (1955539) | 1955539..1957116 | - | 1578 | WP_001088835.1 | yersiniabactin biosynthesis salycil-AMP ligase YbtE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|