MGE detailed information
MGE type: Conjugative plasmid MGE length: 96499 bp
Accession: NZ_CP059004 Location: 1..96499 Organism: Escherichia coli strain 2D Replicon: plasmid p2D-CTX-M-14
Accession: NZ_CP059004 Location: 1..96499 Organism: Escherichia coli strain 2D Replicon: plasmid p2D-CTX-M-14
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0E72_RS24600 () | 1..873 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| H0E72_RS24605 () | 1778..2062 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H0E72_RS24610 () | 2062..2337 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H0E72_RS24615 () | 2502..2783 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| H0E72_RS24620 () | 2974..3240 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| H0E72_RS24625 () | 3378..3980 | - | 603 | WP_180555550.1 | proQ/FINO family protein | - |
| H0E72_RS24630 () | 4156..5208 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| H0E72_RS24635 () | 5421..6026 | - | 606 | WP_180555551.1 | hypothetical protein | - |
| H0E72_RS24640 () | 6026..6280 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| H0E72_RS24645 () | 6547..8046 | + | 1500 | WP_001542563.1 | RES family NAD+ phosphorylase | - |
| H0E72_RS24650 () | 8071..8934 | - | 864 | WP_000654832.1 | hypothetical protein | - |
| H0E72_RS24655 () | 9458..9772 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| H0E72_RS24660 () | 9825..10604 | + | 780 | WP_000535297.1 | hypothetical protein | - |
| H0E72_RS24665 () | 10655..11434 | + | 780 | WP_001302707.1 | site-specific integrase | - |
| H0E72_RS24670 () | 11572..11847 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| H0E72_RS24675 () | 11841..12485 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| H0E72_RS24680 () | 12714..13685 | + | 972 | WP_063269679.1 | plasmid segregation protein parM | - |
| H0E72_RS24685 () | 13690..14082 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| H0E72_RS24690 () | 14087..15358 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| H0E72_RS24695 () | 15358..15795 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H0E72_RS24700 () | 15792..16040 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H0E72_RS24705 () | 16459..17361 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| H0E72_RS24710 () | 17358..17670 | + | 313 | Protein_22 | hypothetical protein | - |
| H0E72_RS24715 () | 17746..18429 | + | 684 | WP_000086137.1 | DNA methylase | - |
| H0E72_RS24720 () | 18430..18651 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| H0E72_RS24725 () | 18665..19099 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| H0E72_RS24730 () | 19144..19914 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| H0E72_RS24735 () | 20452..20754 | + | 303 | WP_072105978.1 | antirestriction protein | - |
| H0E72_RS24740 () | 20801..21223 | + | 423 | WP_000271732.1 | DUF1380 family protein | - |
| H0E72_RS24745 () | 21220..21411 | + | 192 | WP_001024838.1 | hypothetical protein | - |
| H0E72_RS24750 () | 21482..21796 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| H0E72_RS24755 () | 22180..22707 | + | 528 | WP_021532391.1 | single-stranded DNA-binding protein | - |
| H0E72_RS24760 () | 22765..22998 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| H0E72_RS24765 () | 23057..25015 | + | 1959 | WP_097507768.1 | ParB/RepB/Spo0J family partition protein | - |
| H0E72_RS24770 () | 25070..25504 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| H0E72_RS24775 () | 25501..26220 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| H0E72_RS24780 () | 26217..26813 | + | 597 | WP_000977998.1 | hypothetical protein | - |
| H0E72_RS24785 () | 27275..27775 | + | 501 | WP_014065718.1 | antirestriction protein ArdA | - |
| H0E72_RS24790 () | 28508..28942 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| H0E72_RS24795 () | 29035..29301 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| H0E72_RS24800 () | 29478..29867 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| H0E72_RS24805 () | 29864..30778 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| H0E72_RS24810 () | 30778..31023 | + | 246 | WP_021577253.1 | hypothetical protein | - |
| H0E72_RS24815 () | 31054..31305 | - | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| H0E72_RS24820 () | 31339..31536 | - | 198 | WP_024189120.1 | hypothetical protein | - |
| H0E72_RS24825 () | 31884..32732 | + | 849 | WP_001077044.1 | DUF4942 domain-containing protein | - |
| H0E72_RS24830 () | 32818..33153 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H0E72_RS24835 () | 33386..33718 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| H0E72_RS24840 () | 33730..36441 | + | 2712 | WP_000991387.1 | Protein TraI | Relaxase |
| H0E72_RS24845 () | 36509..36940 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| H0E72_RS24850 () | 37038..37268 | - | 231 | WP_071591569.1 | hypothetical protein | - |
| H0E72_RS24855 () | 37650..38075 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| H0E72_RS24860 () | 38072..38422 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| H0E72_RS24865 () | 38453..40066 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| H0E72_RS24870 () | 40275..42578 | - | 2304 | WP_000077664.1 | TraM recognition domain-containing protein | - |
| H0E72_RS24875 () | 42559..43683 | - | 1125 | WP_000152387.1 | DsbC family protein | - |
| H0E72_RS24880 () | 43680..44987 | - | 1308 | WP_021577249.1 | IncI1-type conjugal transfer protein TrbA | - |
| H0E72_RS24885 () | 45628..45879 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| H0E72_RS24890 () | 45942..46118 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| H0E72_RS24895 () | 46268..46735 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| H0E72_RS24900 () | 46894..47517 | + | 624 | WP_001155247.1 | DNA-binding protein | - |
| H0E72_RS24905 () | 47715..47930 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| H0E72_RS24910 () | 47934..48302 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| H0E72_RS24915 () | 48593..48835 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| H0E72_RS24920 () | 49165..49317 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| H0E72_RS24925 () | 49455..51041 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| H0E72_RS24930 () | 51315..51962 | - | 648 | WP_015056434.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H0E72_RS24935 () | 52050..54209 | - | 2160 | WP_000691811.1 | DotA/TraY family protein | - |
| H0E72_RS24940 () | 54284..54853 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| H0E72_RS24945 () | 54850..56055 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| H0E72_RS24950 () | 56013..56633 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| H0E72_RS24955 () | 56633..59677 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| H0E72_RS24960 () | 59972..60790 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| H0E72_RS24965 () | 60705..60956 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| H0E72_RS24970 () | 61013..61411 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| H0E72_RS24975 () | 61458..61985 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| H0E72_RS24980 () | 61985..62698 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| H0E72_RS24985 () | 62695..64032 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| H0E72_RS24990 () | 64036..65010 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| H0E72_RS24995 () | 65021..65716 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| H0E72_RS25000 () | 65728..66078 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| H0E72_RS25005 () | 66095..70156 | - | 4062 | WP_013307874.1 | DNA primase | - |
| H0E72_RS25010 () | 70510..71091 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| H0E72_RS25015 () | 71099..71554 | - | 456 | Protein_83 | IS5 family transposase | - |
| H0E72_RS25020 () | 71589..72464 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| H0E72_RS25025 () | 72714..73976 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| H0E72_RS25030 () | 74388..74678 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| H0E72_RS25035 () | 74675..75823 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| H0E72_RS25040 () | 75807..76643 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| H0E72_RS25045 () | 76640..77098 | - | 459 | WP_025750398.1 | DotD/TraH family lipoprotein | - |
| H0E72_RS25050 () | 77202..78404 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| H0E72_RS25055 () | 78506..79327 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| H0E72_RS25060 () | 79540..80664 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| H0E72_RS25065 () | 80714..81022 | + | 309 | WP_102166912.1 | pilus assembly protein | - |
| H0E72_RS25070 () | 81818..82195 | + | 378 | WP_052972533.1 | phage tail protein | - |
| H0E72_RS25075 () | 82200..83522 | - | 1323 | WP_052993642.1 | hypothetical protein | VF |
| H0E72_RS25080 () | 83540..84166 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| H0E72_RS25085 () | 84182..84667 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| H0E72_RS25090 () | 84712..85248 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| H0E72_RS25095 () | 85310..86404 | - | 1095 | WP_032253914.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H0E72_RS25100 () | 86406..87914 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H0E72_RS25105 () | 88018..88476 | - | 459 | WP_000095886.1 | hypothetical protein | VF |
| H0E72_RS25110 () | 88466..89761 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| H0E72_RS25115 () | 89782..91401 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| H0E72_RS25120 () | 91433..91870 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| H0E72_RS25125 () | 91874..92944 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| H0E72_RS25130 () | 93185..93505 | - | 321 | WP_001447108.1 | hypothetical protein | - |
| H0E72_RS25135 () | 93621..93863 | - | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| H0E72_RS25140 () | 93944..94087 | - | 144 | WP_000176500.1 | hypothetical protein | - |
| H0E72_RS25145 () | 94354..95016 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| H0E72_RS25150 () | 95156..95797 | - | 642 | WP_021515453.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|