MGE detailed information
MGE type: Genomic_island MGE length: 22529 bp
Accession: NZ_CP059003 Location: 4169331..4191859 Organism: Escherichia coli strain 2D Replicon: chromosome
Accession: NZ_CP059003 Location: 4169331..4191859 Organism: Escherichia coli strain 2D Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0E72_RS19970 () | 4164590..4165900 | - | 1311 | WP_000460504.1 | serine dehydratase subunit alpha family protein | - |
| H0E72_RS19975 () | 4165928..4166881 | - | 954 | WP_001613884.1 | inner membrane transporter YhaO | - |
| H0E72_RS19980 () | 4167230..4167811 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| H0E72_RS19985 () | 4167819..4168274 | - | 456 | Protein_3907 | IS5 family transposase | - |
| H0E72_RS19990 () | 4168309..4169184 | - | 876 | WP_001617865.1 | class A extended-spectrum beta-lactamase CTX-M-14 | - |
| H0E72_RS19995 () | 4169434..4170489 | - | 1056 | Protein_3909 | IS1380 family transposase ISEcp1 | Transposase |
| H0E72_RS20000 () | 4170636..4171616 | - | 981 | WP_001594591.1 | IS5 family transposase ISKpn26 | Transposase |
| H0E72_RS20005 () | 4171674..4171895 | - | 222 | Protein_3911 | IS1380 family transposase ISEcp1 | Transposase |
| H0E72_RS20010 () | 4172083..4172460 | - | 378 | Protein_3912 | hypothetical protein | - |
| H0E72_RS20015 () | 4172735..4174099 | - | 1365 | WP_000622115.1 | L-serine ammonia-lyase | - |
| H0E72_RS20020 () | 4174171..4174560 | - | 390 | WP_000719990.1 | enamine/imine deaminase | - |
| H0E72_RS20025 () | 4174574..4176868 | - | 2295 | WP_000861747.1 | 2-ketobutyrate formate-lyase/pyruvate formate-lyase | - |
| H0E72_RS20030 () | 4176902..4178110 | - | 1209 | WP_001361211.1 | propionate kinase | - |
| H0E72_RS20035 () | 4178136..4179467 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| H0E72_RS20040 () | 4179489..4180478 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| H0E72_RS20045 () | 4180577..4181515 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| H0E72_RS20050 () | 4181704..4182048 | + | 345 | WP_000145833.1 | transcriptional activator TdcR | - |
| H0E72_RS20055 () | 4182304..4182843 | + | 540 | WP_000675735.1 | hypothetical protein | - |
| H0E72_RS20060 () | 4182865..4184052 | + | 1188 | WP_000484566.1 | YhaC family protein | - |
| H0E72_RS20070 () | 4184683..4185828 | - | 1146 | WP_001330125.1 | glycerate 2-kinase | - |
| H0E72_RS20075 () | 4185925..4186815 | - | 891 | WP_180555526.1 | 2-hydroxy-3-oxopropionate reductase | - |
| H0E72_RS20080 () | 4186845..4187615 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| H0E72_RS20085 () | 4187631..4188965 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| H0E72_RS20090 () | 4189340..4190911 | + | 1572 | WP_001273756.1 | galactarate dehydratase | - |
| H0E72_RS20095 () | 4191060..4191395 | + | 336 | WP_021547164.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| H0E72_RS20100 () | 4191395..4191859 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| H0E72_RS20105 () | 4191914..4192723 | - | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| H0E72_RS20110 () | 4192972..4194252 | + | 1281 | WP_000681958.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| H0E72_RS20115 () | 4194275..4194748 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| H0E72_RS20120 () | 4194759..4195538 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| H0E72_RS20125 () | 4195528..4196406 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| H0E72_RS20130 () | 4196424..4196858 | + | 435 | WP_000948834.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|