MGE detailed information
MGE type: Genomic_island MGE length: 24224 bp
Accession: NZ_CP058908 Location: 219365..243588 Organism: Pseudomonas phenolilytica strain RBPA9 Replicon: chromosome
Accession: NZ_CP058908 Location: 219365..243588 Organism: Pseudomonas phenolilytica strain RBPA9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU825_RS01125 (HU825_01125) | 214484..215344 | + | 861 | WP_043297482.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| HU825_RS01140 (HU825_01140) | 215643..216584 | + | 942 | WP_008567058.1 | ribose-phosphate pyrophosphokinase | - |
| HU825_RS01145 (HU825_01145) | 216703..217320 | + | 618 | WP_043297481.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| HU825_RS01150 (HU825_01150) | 217360..217944 | + | 585 | WP_043297480.1 | aminoacyl-tRNA hydrolase | - |
| HU825_RS01155 (HU825_01155) | 217969..219069 | + | 1101 | WP_043297479.1 | redox-regulated ATPase YchF | - |
| HU825_RS01160 (HU825_01160) | 219365..220528 | + | 1164 | WP_234302740.1 | Acyl-CoA dehydrogenase | VF |
| HU825_RS01165 (HU825_01165) | 220623..222230 | + | 1608 | WP_234302741.1 | carboxyl transferase domain-containing protein | - |
| HU825_RS01170 (HU825_01170) | 222288..223085 | + | 798 | WP_234302742.1 | gamma-carboxygeranoyl-CoA hydratase | - |
| HU825_RS01175 (HU825_01175) | 223085..224995 | + | 1911 | WP_234302743.1 | acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha | - |
| HU825_RS01180 (HU825_01180) | 225157..226056 | + | 900 | WP_234302744.1 | hydroxymethylglutaryl-CoA lyase | - |
| HU825_RS01185 (HU825_01185) | 226140..226835 | + | 696 | WP_234302745.1 | CoA transferase subunit A | - |
| HU825_RS01190 (HU825_01190) | 226840..227469 | + | 630 | WP_234302746.1 | CoA transferase subunit B | - |
| HU825_RS01195 (HU825_01195) | 227629..228810 | + | 1182 | WP_234302747.1 | Acetyl-CoA acetyltransferase | VF |
| HU825_RS01200 (HU825_01200) | 228880..229278 | + | 399 | WP_043297472.1 | MerR family DNA-binding transcriptional regulator | - |
| HU825_RS01205 (HU825_01205) | 229593..231092 | + | 1500 | WP_138300344.1 | Regulatory protein AtoC | VF |
| HU825_RS01210 (HU825_01210) | 231178..231576 | + | 399 | WP_043297470.1 | DoxX family protein | - |
| HU825_RS01215 (HU825_01215) | 231847..233541 | + | 1695 | WP_234302748.1 | tannase/feruloyl esterase family alpha/beta hydrolase | - |
| HU825_RS01220 (HU825_01220) | 233814..235076 | + | 1263 | WP_234302749.1 | OprD family porin | - |
| HU825_RS01225 | 235165..235309 | + | 145 | Protein_230 | integrase | - |
| HU825_RS01230 (HU825_01225) | 235362..235607 | + | 246 | WP_077683726.1 | plasmid stabilization protein | Antitoxin Detail |
| HU825_RS01235 (HU825_01230) | 235604..236023 | + | 420 | WP_234302750.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HU825_RS01245 (HU825_01240) | 236311..237180 | - | 870 | WP_234303433.1 | DMT family transporter | - |
| HU825_RS01250 (HU825_01245) | 237219..237863 | - | 645 | WP_008567215.1 | carbonate dehydratase | - |
| HU825_RS01255 (HU825_01250) | 237964..239343 | - | 1380 | WP_043297467.1 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | - |
| HU825_RS01260 (HU825_01255) | 239384..240130 | - | 747 | WP_234302751.1 | trehalose-phosphatase | - |
| HU825_RS01265 (HU825_01260) | 240257..240799 | + | 543 | WP_234302752.1 | hypothetical protein | - |
| HU825_RS01270 (HU825_01265) | 240809..241261 | - | 453 | WP_043297464.1 | Ribosomal-protein-alanine acetyltransferase | VF |
| HU825_RS01275 (HU825_01270) | 241268..242047 | - | 780 | WP_234302753.1 | energy transducer TonB | - |
| HU825_RS01280 (HU825_01275) | 242044..243588 | - | 1545 | WP_234302754.1 | 2-isopropylmalate synthase | - |
| HU825_RS01285 (HU825_01280) | 244049..245290 | - | 1242 | WP_234302755.1 | saccharopine dehydrogenase family protein | - |
| HU825_RS01290 (HU825_01285) | 245320..246417 | - | 1098 | WP_234302756.1 | carboxynorspermidine decarboxylase | - |
| HU825_RS01295 (HU825_01290) | 246693..247934 | + | 1242 | WP_234302757.1 | Mks condensin complex protein MksB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|