MGE detailed information
MGE type: Prophage MGE length: 11536 bp
Accession: NZ_CP058908 Location: 2146479..2158014 Organism: Pseudomonas phenolilytica strain RBPA9 Replicon: chromosome
Accession: NZ_CP058908 Location: 2146479..2158014 Organism: Pseudomonas phenolilytica strain RBPA9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU825_RS10335 | 2141511..2141666 | - | 156 | WP_234301977.1 | hypothetical protein | - |
| HU825_RS10340 (HU825_10320) | 2141912..2142127 | + | 216 | WP_014819553.1 | hypothetical protein | - |
| HU825_RS10345 (HU825_10325) | 2142124..2142273 | + | 150 | WP_234301978.1 | helix-turn-helix domain-containing protein | - |
| HU825_RS10350 | 2142270..2142587 | + | 318 | WP_234301979.1 | Arc family DNA-binding protein | - |
| HU825_RS10355 (HU825_10335) | 2142591..2142926 | + | 336 | WP_234301980.1 | DUF5447 family protein | - |
| HU825_RS10360 (HU825_10340) | 2143610..2143969 | + | 360 | WP_234301981.1 | hypothetical protein | - |
| HU825_RS10365 (HU825_10345) | 2143985..2144161 | + | 177 | WP_234301982.1 | hypothetical protein | - |
| HU825_RS10370 (HU825_10350) | 2144158..2144373 | + | 216 | WP_015277797.1 | hypothetical protein | - |
| HU825_RS10375 (HU825_10355) | 2144384..2144593 | + | 210 | WP_043298724.1 | major capsid protein | - |
| HU825_RS10380 | 2144743..2146140 | + | 1398 | WP_234301983.1 | virulence factor TspB C-terminal domain-related protein | - |
| HU825_RS10385 (HU825_10365) | 2146140..2146466 | + | 327 | WP_043298722.1 | DUF2523 domain-containing protein | - |
| HU825_RS10390 (HU825_10370) | 2146479..2147657 | + | 1179 | WP_234301984.1 | zonular occludens toxin domain-containing protein | - |
| HU825_RS10395 (HU825_10375) | 2147804..2149081 | + | 1278 | WP_234301985.1 | hypothetical protein | - |
| HU825_RS10400 (HU825_10380) | 2149081..2150088 | + | 1008 | WP_234301986.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| HU825_RS10405 (HU825_10385) | 2150130..2150444 | + | 315 | WP_165595285.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HU825_RS10410 (HU825_10390) | 2150450..2150740 | + | 291 | WP_165595284.1 | NadS family protein | Antitoxin Detail |
| HU825_RS10420 (HU825_10400) | 2150996..2151688 | - | 693 | WP_156716373.1 | pseudouridine synthase | - |
| HU825_RS10425 (HU825_10405) | 2151688..2151894 | - | 207 | WP_156716374.1 | cysteine-rich CWC family protein | - |
| HU825_RS10430 (HU825_10410) | 2151956..2153995 | - | 2040 | WP_234301987.1 | methionine--tRNA ligase | - |
| HU825_RS10435 (HU825_10415) | 2154178..2155272 | + | 1095 | WP_043295974.1 | iron-sulfur cluster carrier protein ApbC | - |
| HU825_RS10440 (HU825_10420) | 2155382..2155591 | - | 210 | WP_003282211.1 | cold-shock protein | - |
| HU825_RS10445 (HU825_10425) | 2155919..2156485 | + | 567 | WP_043295975.1 | dCTP deaminase | - |
| HU825_RS10450 (HU825_10430) | 2156543..2157244 | - | 702 | WP_043295976.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| HU825_RS10455 (HU825_10435) | 2157247..2158014 | - | 768 | WP_043295977.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | - |
| HU825_RS10460 (HU825_10440) | 2158011..2159267 | - | 1257 | WP_043295978.1 | high-affinity branched-chain amino acid ABC transporter permease LivM | - |
| HU825_RS10465 (HU825_10445) | 2159264..2160187 | - | 924 | WP_043295979.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| HU825_RS10470 (HU825_10450) | 2160438..2161556 | - | 1119 | WP_043295980.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
| HU825_RS10475 (HU825_10455) | 2161755..2162072 | + | 318 | WP_008566728.1 | DUF2288 domain-containing protein | - |
| HU825_RS10480 (HU825_10460) | 2162101..2162868 | - | 768 | WP_043295981.1 | phosphonate ABC transporter, permease protein PhnE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|