MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95227 bp
Accession: NZ_CP058887 Location: 1..95227 Organism: Shigella flexneri strain STLEFF_33 Replicon: plasmid unnamed1
Accession: NZ_CP058887 Location: 1..95227 Organism: Shigella flexneri strain STLEFF_33 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT25_RS22525 (HZT25_22400) | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| HZT25_RS22530 (HZT25_22405) | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| HZT25_RS22535 (HZT25_22410) | 2463..3428 | + | 966 | WP_023338075.1 | ParB family protein | - |
| HZT25_RS22540 (HZT25_22415) | 3693..4688 | + | 996 | Protein_3 | hypothetical protein | - |
| HZT25_RS22545 (HZT25_22420) | 4800..5539 | + | 740 | Protein_4 | IS3 family transposase IS629 | Transposase |
| HZT25_RS22550 (HZT25_22425) | 6212..7720 | + | 1509 | WP_240767362.1 | group II intron reverse transcriptase/maturase | - |
| HZT25_RS22555 (HZT25_22430) | 7801..8277 | + | 477 | Protein_6 | IS3 family transposase ISEhe3 | Transposase |
| HZT25_RS22560 (HZT25_22435) | 8668..8859 | + | 192 | WP_001041614.1 | Rop family plasmid primer RNA-binding protein | - |
| HZT25_RS22565 (HZT25_22440) | 9347..9733 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| HZT25_RS22570 (HZT25_22445) | 9873..10841 | - | 969 | WP_240767358.1 | IS5 family transposase IS903B | Transposase |
| HZT25_RS22575 (HZT25_22450) | 12022..12330 | - | 309 | Protein_10 | replication initiation protein | - |
| HZT25_RS22585 (HZT25_22460) | 13189..14676 | - | 1488 | WP_023300763.1 | group II intron reverse transcriptase/maturase | - |
| HZT25_RS22590 (HZT25_22465) | 15082..15513 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HZT25_RS22595 (HZT25_22470) | 15513..16784 | + | 1272 | WP_101975725.1 | Y-family DNA polymerase | - |
| HZT25_RS22600 (HZT25_22475) | 16866..17840 | - | 975 | WP_000064120.1 | ParB family protein | - |
| HZT25_RS22605 (HZT25_22480) | 17840..19045 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| HZT25_RS22610 (HZT25_22485) | 19460..19729 | + | 270 | WP_072656591.1 | hypothetical protein | - |
| HZT25_RS22615 (HZT25_22490) | 20086..20952 | - | 867 | WP_240767360.1 | replication initiation protein | - |
| HZT25_RS22620 (HZT25_22495) | 21487..21591 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| HZT25_RS22625 (HZT25_22500) | 21720..21977 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| HZT25_RS22630 (HZT25_22505) | 22035..22811 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| HZT25_RS22635 (HZT25_22510) | 22808..23551 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| HZT25_RS22640 (HZT25_22515) | 23602..23952 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| HZT25_RS22645 (HZT25_22520) | 24346..25419 | + | 1074 | WP_077890912.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| HZT25_RS22650 (HZT25_22525) | 25712..26626 | + | 915 | WP_052686739.1 | Abi family protein | - |
| HZT25_RS22655 (HZT25_22530) | 26881..27111 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HZT25_RS22660 (HZT25_22535) | 27108..27524 | + | 417 | WP_044864680.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZT25_RS22665 (HZT25_22540) | 27733..28713 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| HZT25_RS22670 (HZT25_22545) | 28914..31979 | - | 3066 | WP_000002334.1 | tetrathionate reductase subunit TtrA | - |
| HZT25_RS22675 (HZT25_22550) | 31972..32994 | - | 1023 | WP_044864557.1 | tetrathionate reductase subunit TtrC | - |
| HZT25_RS22680 (HZT25_22555) | 32995..33747 | - | 753 | WP_077910396.1 | tetrathionate reductase subunit TtrB | - |
| HZT25_RS22685 (HZT25_22560) | 33957..35690 | + | 1734 | WP_080950116.1 | Tetrathionate sensor histidine kinase TtrS | VF |
| HZT25_RS22690 (HZT25_22565) | 35665..36249 | + | 585 | WP_000974596.1 | Tetrathionate response regulatory protein TtrR | VF |
| HZT25_RS22695 (HZT25_22570) | 36342..36545 | + | 204 | WP_000528119.1 | fumarate hydratase FumD | - |
| HZT25_RS22700 (HZT25_22575) | 36654..37370 | - | 717 | Protein_35 | IS5 family transposase IS5D | Transposase |
| HZT25_RS23190 (HZT25_22580) | 37559..39115 | - | 1557 | WP_053897648.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| HZT25_RS22715 (HZT25_22585) | 39140..39843 | + | 704 | Protein_37 | IS6 family transposase IS15DI | Transposase |
| HZT25_RS22720 (HZT25_22590) | 39898..40314 | + | 417 | Protein_38 | serine hydrolase | - |
| HZT25_RS22725 (HZT25_22595) | 40461..41363 | + | 903 | Protein_39 | TCR/Tet family MFS transporter | - |
| HZT25_RS22730 (HZT25_22600) | 41330..41518 | - | 189 | Protein_40 | IS91 family transposase | - |
| HZT25_RS22735 (HZT25_22605) | 41630..41935 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HZT25_RS22740 (HZT25_22610) | 41963..43177 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| HZT25_RS22745 (HZT25_22615) | 43394..44278 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HZT25_RS22750 (HZT25_22620) | 44309..45802 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| HZT25_RS22755 (HZT25_22625) | 46013..46237 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| HZT25_RS22760 (HZT25_22630) | 46234..46971 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZT25_RS22765 (HZT25_22635) | 47457..47597 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| HZT25_RS22770 (HZT25_22640) | 47603..48304 | - | 702 | WP_124053903.1 | IS6 family transposase IS26 | Transposase |
| HZT25_RS22775 (HZT25_22645) | 48551..49024 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| HZT25_RS22780 (HZT25_22650) | 49052..49890 | - | 839 | Protein_50 | Streptomycin 3''-adenylyltransferase | ARG |
| HZT25_RS22785 (HZT25_22655) | 49907..50707 | - | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| HZT25_RS22790 (HZT25_22660) | 50972..52231 | - | 1260 | WP_012300772.1 | Bicyclomycin resistance protein | ARG |
| HZT25_RS22795 (HZT25_22665) | 52552..53004 | - | 453 | WP_000237816.1 | hypothetical protein | ARG |
| HZT25_RS22800 (HZT25_22670) | 53177..54289 | + | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| HZT25_RS22805 (HZT25_22675) | 54235..54939 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT25_RS22810 (HZT25_22680) | 55006..55622 | - | 617 | Protein_56 | transposase | - |
| HZT25_RS22815 (HZT25_22685) | 56017..56673 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HZT25_RS22820 (HZT25_22690) | 56992..57420 | - | 429 | Protein_58 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HZT25_RS22825 (HZT25_22695) | 57453..58844 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| HZT25_RS22830 (HZT25_22700) | 58881..59453 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| HZT25_RS22835 (HZT25_22705) | 59590..60135 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| HZT25_RS22840 (HZT25_22710) | 60298..60540 | + | 243 | WP_000844627.1 | transposase | - |
| HZT25_RS22845 (HZT25_22715) | 60572..61222 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZT25_RS22850 (HZT25_22720) | 61328..62527 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| HZT25_RS22855 (HZT25_22725) | 62559..63443 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| HZT25_RS22860 (HZT25_22730) | 63581..63973 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HZT25_RS22865 (HZT25_22735) | 63977..65728 | + | 1752 | Protein_67 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZT25_RS22870 (HZT25_22740) | 65762..66031 | - | 270 | Protein_68 | IS5 family transposase IS5D | Transposase |
| HZT25_RS22875 (HZT25_22745) | 66264..66961 | + | 698 | WP_240765058.1 | IS1 family transposase IS1R | Transposase |
| HZT25_RS22880 (HZT25_22750) | 67095..67523 | + | 429 | WP_001554382.1 | GFA family protein | - |
| HZT25_RS22885 (HZT25_22755) | 68447..69223 | - | 777 | Protein_71 | IS5 family transposase ISKpn26 | Transposase |
| HZT25_RS22890 (HZT25_22760) | 69499..69852 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HZT25_RS22895 (HZT25_22765) | 69900..70262 | + | 363 | WP_240767356.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HZT25_RS22900 (HZT25_22770) | 70280..72031 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HZT25_RS22905 (HZT25_22775) | 72080..73369 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HZT25_RS22910 (HZT25_22780) | 73382..73807 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| HZT25_RS22915 (HZT25_22785) | 73838..74212 | - | 375 | WP_000110555.1 | ArsA-related P-loop ATPase | - |
| HZT25_RS22920 (HZT25_22790) | 74247..74819 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HZT25_RS22925 (HZT25_22795) | 74896..75600 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT25_RS22930 (HZT25_22800) | 75664..76848 | + | 1185 | Protein_80 | cellulose biosynthesis protein BcsE | - |
| HZT25_RS22935 (HZT25_22805) | 76848..77045 | + | 198 | WP_002921518.1 | cellulose biosynthesis protein BcsF | - |
| HZT25_RS22940 (HZT25_22810) | 77042..78721 | + | 1680 | WP_101975717.1 | cellulose biosynthesis protein BcsG | - |
| HZT25_RS22945 (HZT25_22815) | 78829..79830 | - | 1002 | WP_101975716.1 | glycosyl hydrolase family 8 | - |
| HZT25_RS22950 (HZT25_22820) | 79842..80318 | - | 477 | WP_002921529.1 | cellulose biosynthesis protein BcsD | - |
| HZT25_RS22955 (HZT25_22825) | 80318..84370 | - | 4053 | WP_023284374.1 | cellulose biosynthesis protein BcsC | - |
| HZT25_RS22960 (HZT25_22830) | 84367..86802 | - | 2436 | WP_004215309.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| HZT25_RS22965 (HZT25_22835) | 86799..88910 | - | 2112 | WP_050516608.1 | UDP-forming cellulose synthase catalytic subunit | - |
| HZT25_RS22970 (HZT25_22840) | 88930..89722 | - | 793 | Protein_88 | Cellulose biosynthesis protein BcsQ | VF |
| HZT25_RS22975 (HZT25_22845) | 89724..90263 | - | 540 | WP_033545677.1 | cellulose biosynthesis protein BcsO | - |
| HZT25_RS22980 (HZT25_22850) | 90474..91454 | - | 981 | WP_072666959.1 | IS5 family transposase ISEc68 | Transposase |
| HZT25_RS22985 (HZT25_22855) | 91661..91942 | + | 282 | WP_021312774.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HZT25_RS22990 (HZT25_22860) | 91942..92244 | + | 303 | WP_001698908.1 | HigA family addiction module antitoxin | - |
| HZT25_RS22995 (HZT25_22865) | 92881..93847 | - | 967 | Protein_93 | IS5 family transposase | - |
| HZT25_RS23000 (HZT25_22870) | 93880..94434 | - | 555 | Protein_94 | IS30 family transposase IS30D | Transposase |
| HZT25_RS23005 (HZT25_22875) | 94502..94789 | - | 288 | Protein_95 | IS3 family transposase ISEc52 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|