MGE detailed information
MGE type: Conjugative plasmid MGE length: 82730 bp
Accession: NZ_CP058882 Location: 1..82730 Organism: Escherichia coli strain STLEFF_29 Replicon: plasmid unnamed3
Accession: NZ_CP058882 Location: 1..82730 Organism: Escherichia coli strain STLEFF_29 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT24_RS24725 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| HZT24_RS24730 (1773) | 1773..1913 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| HZT24_RS24735 (2146) | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| HZT24_RS24740 (2711) | 2711..3313 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| HZT24_RS24745 (3667) | 3667..5013 | + | 1347 | WP_001703911.1 | protein YagA | - |
| HZT24_RS24750 (5560) | 5560..5862 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| HZT24_RS24755 (5859) | 5859..6485 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| HZT24_RS24760 (6673) | 6673..7944 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| HZT24_RS24765 (7944) | 7944..8381 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HZT24_RS24770 (8378) | 8378..8626 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HZT24_RS24775 (9044) | 9044..9946 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| HZT24_RS24780 (9950) | 9950..10036 | + | 87 | Protein_11 | hypothetical protein | - |
| HZT24_RS24785 (10041) | 10041..10376 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| HZT24_RS24790 (10714) | 10714..11694 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| HZT24_RS24795 (11697) | 11697..12119 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| HZT24_RS24800 (12123) | 12123..12434 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| HZT24_RS24805 (12510) | 12510..13193 | + | 684 | WP_000086127.1 | DNA methylase | - |
| HZT24_RS24810 (13194) | 13194..13415 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| HZT24_RS24815 (13345) | 13345..13863 | + | 519 | WP_202864534.1 | DUF1380 family protein | - |
| HZT24_RS24820 (13908) | 13908..14678 | + | 771 | WP_096947577.1 | hypothetical protein | - |
| HZT24_RS24825 (15091) | 15091..15516 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| HZT24_RS24830 (15563) | 15563..15985 | + | 423 | WP_104858494.1 | DUF1380 family protein | - |
| HZT24_RS24835 (15982) | 15982..16173 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HZT24_RS24840 (16244) | 16244..16558 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| HZT24_RS24845 (16942) | 16942..17469 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| HZT24_RS24850 (17527) | 17527..17760 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| HZT24_RS24855 (17819) | 17819..19777 | + | 1959 | WP_240726770.1 | ParB/RepB/Spo0J family partition protein | - |
| HZT24_RS24860 (19830) | 19830..20264 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| HZT24_RS24865 (20261) | 20261..20980 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| HZT24_RS24870 (20977) | 20977..21573 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| HZT24_RS24875 (22035) | 22035..22535 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| HZT24_RS24880 (23264) | 23264..23698 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| HZT24_RS24885 (23792) | 23792..24058 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| HZT24_RS24890 (24235) | 24235..24624 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| HZT24_RS24895 (24621) | 24621..25523 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| HZT24_RS24900 (25585) | 25585..25791 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| HZT24_RS24905 (25822) | 25822..26073 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| HZT24_RS24910 (26653) | 26653..27501 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| HZT24_RS24915 (27588) | 27588..27923 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| HZT24_RS24920 (28157) | 28157..28489 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HZT24_RS24925 (28500) | 28500..31199 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| HZT24_RS24930 (31238) | 31238..33529 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| HZT24_RS24935 (33522) | 33522..34592 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| HZT24_RS24940 (34611) | 34611..35819 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (35999) | 35999..36056 | - | 58 | NuclAT_1 | - | - |
| - (35999) | 35999..36056 | - | 58 | NuclAT_1 | - | - |
| - (35999) | 35999..36056 | - | 58 | NuclAT_1 | - | - |
| - (35999) | 35999..36056 | - | 58 | NuclAT_1 | - | - |
| HZT24_RS24945 (36126) | 36126..37211 | - | 1086 | WP_074446708.1 | protein finQ | - |
| - (37420) | 37420..37480 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (37420) | 37420..37480 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (37420) | 37420..37480 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (37420) | 37420..37480 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| HZT24_RS24950 (37532) | 37532..37684 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| HZT24_RS24955 (37756) | 37756..38007 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| HZT24_RS25625 (38508) | 38508..38603 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| HZT24_RS24965 (38668) | 38668..38844 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| HZT24_RS24970 (39027) | 39027..39236 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| HZT24_RS24975 (39334) | 39334..39948 | - | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HZT24_RS24980 (40024) | 40024..42192 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| HZT24_RS24985 (42289) | 42289..42873 | - | 585 | WP_001037983.1 | IncI1-type conjugal transfer protein TraX | - |
| HZT24_RS24990 (42902) | 42902..44104 | - | 1203 | WP_001387490.1 | IncI1-type conjugal transfer protein TraW | - |
| HZT24_RS24995 (44071) | 44071..44685 | - | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| HZT24_RS25000 (44685) | 44685..47729 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| HZT24_RS25005 (47819) | 47819..48619 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HZT24_RS25010 (48603) | 48603..48791 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HZT24_RS25015 (48855) | 48855..49259 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| HZT24_RS25020 (49310) | 49310..49837 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HZT24_RS25025 (49837) | 49837..50541 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HZT24_RS25030 (50541) | 50541..51830 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| HZT24_RS25035 (51833) | 51833..52816 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| HZT24_RS25040 (52827) | 52827..53519 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HZT24_RS25045 (53516) | 53516..53863 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HZT24_RS25050 (53881) | 53881..57645 | - | 3765 | WP_001141540.1 | DUF5710 domain-containing protein | - |
| HZT24_RS25055 (57735) | 57735..58286 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| HZT24_RS25060 (58301) | 58301..58591 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| HZT24_RS25065 (58588) | 58588..59736 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| HZT24_RS25070 (59733) | 59733..60551 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| HZT24_RS25075 (60548) | 60548..61006 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HZT24_RS25080 (61401) | 61401..61985 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HZT24_RS25085 (62045) | 62045..63247 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| HZT24_RS25090 (63333) | 63333..64157 | - | 825 | WP_023518851.1 | conjugal transfer protein TraE | - |
| HZT24_RS25095 (64308) | 64308..65462 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| HZT24_RS25100 (66983) | 66983..67231 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| HZT24_RS25105 (67228) | 67228..68520 | - | 1293 | WP_001619585.1 | hypothetical protein | VF |
| HZT24_RS25110 (68520) | 68520..69176 | - | 657 | WP_001401940.1 | hypothetical protein | VF |
| HZT24_RS25115 (69161) | 69161..69721 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| HZT24_RS25120 (69731) | 69731..70345 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| HZT24_RS25125 (70362) | 70362..71447 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HZT24_RS25130 (71460) | 71460..73013 | - | 1554 | WP_023518854.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HZT24_RS25135 (73024) | 73024..73476 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| HZT24_RS25140 (73463) | 73463..74758 | - | 1296 | WP_023518855.1 | type 4b pilus protein PilO2 | - |
| HZT24_RS25145 (74751) | 74751..76433 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HZT24_RS25150 (76447) | 76447..76884 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| HZT24_RS25155 (76884) | 76884..77951 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| HZT24_RS25160 (78998) | 78998..79252 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HZT24_RS25165 (79424) | 79424..80107 | - | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| HZT24_RS25170 (80361) | 80361..80894 | - | 534 | WP_001712498.1 | transcription termination/antitermination NusG family protein | - |
| HZT24_RS25175 (81336) | 81336..81623 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| HZT24_RS25180 (81661) | 81661..81819 | - | 159 | Protein_91 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|