MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122103 bp
Accession: NZ_CP058854 Location: 1..122103 Organism: Shigella flexneri strain STLEFF_38 Replicon: plasmid unnamed1
Accession: NZ_CP058854 Location: 1..122103 Organism: Shigella flexneri strain STLEFF_38 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT29_RS22550 (HZT29_22330) | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| HZT29_RS22555 (HZT29_22335) | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| HZT29_RS22560 (HZT29_22340) | 2463..3428 | + | 966 | WP_023338075.1 | ParB family protein | - |
| HZT29_RS22565 (HZT29_22345) | 3693..4688 | + | 996 | Protein_3 | hypothetical protein | - |
| HZT29_RS22570 (HZT29_22350) | 4800..5539 | + | 740 | Protein_4 | IS3 family transposase IS629 | Transposase |
| HZT29_RS22575 (HZT29_22355) | 6212..7720 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HZT29_RS22580 (HZT29_22360) | 7801..8277 | + | 477 | Protein_6 | IS3 family transposase ISEhe3 | Transposase |
| HZT29_RS22585 (HZT29_22365) | 8668..8859 | + | 192 | WP_001041614.1 | Rop family plasmid primer RNA-binding protein | - |
| HZT29_RS22590 (HZT29_22370) | 9347..9733 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| HZT29_RS22595 (HZT29_22375) | 9873..10841 | - | 969 | WP_020956880.1 | IS5 family transposase IS903B | Transposase |
| HZT29_RS22600 (HZT29_22380) | 12022..12330 | - | 309 | Protein_10 | replication initiation protein | - |
| HZT29_RS22610 (HZT29_22390) | 13189..14676 | - | 1488 | WP_023300763.1 | group II intron reverse transcriptase/maturase | - |
| HZT29_RS22615 (HZT29_22395) | 15082..15513 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HZT29_RS22620 (HZT29_22400) | 15513..16784 | + | 1272 | WP_004118291.1 | Y-family DNA polymerase | - |
| HZT29_RS22625 (HZT29_22405) | 16866..17840 | - | 975 | WP_000064120.1 | ParB family protein | - |
| HZT29_RS22630 (HZT29_22410) | 17840..19045 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| HZT29_RS22635 (HZT29_22415) | 19460..19729 | + | 270 | WP_072656591.1 | hypothetical protein | - |
| HZT29_RS22640 (HZT29_22420) | 20086..20952 | - | 867 | Protein_18 | replication initiation protein | - |
| HZT29_RS22645 (HZT29_22425) | 21487..21591 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| HZT29_RS22650 (HZT29_22430) | 21720..21977 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| HZT29_RS22655 (HZT29_22435) | 22035..22811 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| HZT29_RS22660 (HZT29_22440) | 22808..23551 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| HZT29_RS22665 (HZT29_22445) | 23602..23952 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| HZT29_RS22670 (HZT29_22450) | 24346..25419 | + | 1074 | WP_077890912.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| HZT29_RS22675 (HZT29_22455) | 25712..26626 | + | 915 | WP_052686739.1 | Abi family protein | - |
| HZT29_RS22680 (HZT29_22460) | 26881..27111 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HZT29_RS22685 (HZT29_22465) | 27108..27524 | + | 417 | WP_044864680.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZT29_RS22690 (HZT29_22470) | 27733..28713 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| HZT29_RS22695 (HZT29_22475) | 28759..29865 | - | 1107 | WP_240765056.1 | Dyp-type peroxidase | - |
| HZT29_RS22700 (HZT29_22480) | 29917..30288 | - | 372 | Protein_30 | NAD(P)-dependent oxidoreductase | - |
| HZT29_RS22705 (HZT29_22485) | 30346..31043 | + | 698 | WP_240765058.1 | IS1 family transposase IS1R | Transposase |
| HZT29_RS22710 (HZT29_22490) | 31177..31605 | + | 429 | WP_001554382.1 | GFA family protein | - |
| HZT29_RS22715 (HZT29_22495) | 32504..32861 | - | 358 | Protein_33 | IS1 family transposase IS1X4 | Transposase |
| HZT29_RS22720 (HZT29_22500) | 33053..34030 | + | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| HZT29_RS22725 (HZT29_22505) | 34078..34341 | - | 264 | WP_001531263.1 | hypothetical protein | - |
| HZT29_RS22730 (HZT29_22510) | 34376..36127 | - | 1752 | Protein_36 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZT29_RS22735 (HZT29_22515) | 36131..36523 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HZT29_RS22740 (HZT29_22520) | 36661..37545 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| HZT29_RS22745 (HZT29_22525) | 37577..38776 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HZT29_RS22750 (HZT29_22530) | 38882..39532 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZT29_RS22755 (HZT29_22535) | 39564..39806 | - | 243 | WP_024203663.1 | hypothetical protein | - |
| HZT29_RS22760 (HZT29_22540) | 39864..41414 | - | 1551 | Protein_42 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZT29_RS22765 (HZT29_22545) | 41469..42173 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| HZT29_RS22770 (HZT29_22550) | 42437..43510 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| HZT29_RS22775 (HZT29_22555) | 43554..43703 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| HZT29_RS22780 | 43910..44020 | - | 111 | Protein_46 | protein YdfV | - |
| HZT29_RS22785 (HZT29_22560) | 44045..44284 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| HZT29_RS22790 (HZT29_22565) | 44284..44442 | + | 159 | Protein_48 | type II toxin-antitoxin system mRNA interferase RelE | - |
| HZT29_RS22795 (HZT29_22570) | 44475..47483 | - | 3009 | WP_001556712.1 | Tn3 family transposase ISEc63 | Transposase |
| HZT29_RS22800 (HZT29_22575) | 47647..48204 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HZT29_RS22805 (HZT29_22580) | 48387..49247 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HZT29_RS22810 (HZT29_22585) | 49656..51386 | + | 1731 | WP_032623598.1 | penicillin-binding transpeptidase domain-containing protein | - |
| HZT29_RS22815 (HZT29_22590) | 51451..52308 | + | 858 | WP_012477595.1 | Beta-lactamase TEM | ARG |
| HZT29_RS22820 (HZT29_22595) | 52357..53492 | - | 1136 | Protein_54 | IS3 family transposase ISAs17 | Transposase |
| HZT29_RS22825 (HZT29_22600) | 53887..54543 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HZT29_RS22830 (HZT29_22605) | 54862..55290 | - | 429 | Protein_56 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HZT29_RS22835 (HZT29_22610) | 55323..56714 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| HZT29_RS22840 (HZT29_22615) | 56751..57323 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| HZT29_RS22845 (HZT29_22620) | 57460..58005 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| HZT29_RS22850 (HZT29_22625) | 58206..58610 | + | 405 | Protein_60 | IS91 family transposase ISPps1 | Transposase |
| HZT29_RS22855 (HZT29_22635) | 58717..59553 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| HZT29_RS22860 (HZT29_22640) | 59553..60356 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HZT29_RS22865 (HZT29_22645) | 60417..61232 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HZT29_RS22870 | 61562..61648 | + | 87 | Protein_64 | Arm DNA-binding domain-containing protein | - |
| HZT29_RS22875 (HZT29_22655) | 61920..62924 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| HZT29_RS22880 (HZT29_22660) | 63003..64769 | - | 1767 | Protein_66 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| HZT29_RS22885 (HZT29_22665) | 64821..65525 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT29_RS22890 (HZT29_22670) | 65772..66245 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| HZT29_RS22895 (HZT29_22675) | 66401..67414 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HZT29_RS22900 (HZT29_22680) | 67896..68600 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT29_RS22905 (HZT29_22685) | 68935..69327 | + | 393 | WP_064055682.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| HZT29_RS22910 (HZT29_22690) | 69386..70354 | - | 969 | WP_219409931.1 | IS5 family transposase IS903B | Transposase |
| HZT29_RS22915 (HZT29_22695) | 70713..71099 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| HZT29_RS22920 (HZT29_22700) | 71293..71997 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT29_RS22925 (HZT29_22705) | 72065..72379 | + | 315 | Protein_75 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HZT29_RS22930 (HZT29_22710) | 72379..72630 | + | 252 | Protein_76 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HZT29_RS22935 (HZT29_22715) | 72823..73227 | + | 405 | WP_012565008.1 | ester cyclase | - |
| HZT29_RS22940 (HZT29_22720) | 73247..74200 | + | 954 | WP_016245980.1 | helix-turn-helix domain-containing protein | - |
| HZT29_RS22945 (HZT29_22725) | 74271..75047 | + | 777 | WP_001743176.1 | MBL fold metallo-hydrolase | - |
| HZT29_RS22950 (HZT29_22730) | 75447..78434 | - | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HZT29_RS22955 (HZT29_22735) | 78602..79006 | + | 405 | Protein_81 | recombinase family protein | - |
| HZT29_RS22960 (HZT29_22740) | 79134..80267 | - | 1134 | WP_063120614.1 | permease | - |
| HZT29_RS22965 (HZT29_22745) | 80373..80696 | + | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HZT29_RS22970 (HZT29_22750) | 80798..81495 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| HZT29_RS22975 (HZT29_22755) | 81741..82172 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| HZT29_RS22980 (HZT29_22760) | 82316..82624 | + | 309 | WP_025670887.1 | DUF305 domain-containing protein | - |
| HZT29_RS22985 (HZT29_22765) | 82618..82848 | - | 231 | Protein_87 | IS1 family transposase IS1A | Transposase |
| HZT29_RS22990 (HZT29_22770) | 82899..83603 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT29_RS22995 (HZT29_22775) | 83676..83894 | + | 219 | Protein_89 | IS1 family transposase IS1X2 | Transposase |
| HZT29_RS23000 (HZT29_22780) | 84140..84571 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| HZT29_RS23005 (HZT29_22785) | 84715..85023 | + | 309 | WP_025670887.1 | DUF305 domain-containing protein | - |
| HZT29_RS23010 (HZT29_22790) | 85017..85247 | - | 231 | Protein_92 | IS1 family transposase IS1A | Transposase |
| HZT29_RS23015 (HZT29_22795) | 85298..86002 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT29_RS23020 (HZT29_22800) | 86075..86293 | + | 219 | Protein_94 | IS1 family transposase IS1X2 | Transposase |
| HZT29_RS23025 (HZT29_22805) | 86539..86970 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| HZT29_RS23030 (HZT29_22810) | 87114..87422 | + | 309 | WP_025670887.1 | DUF305 domain-containing protein | - |
| HZT29_RS23035 (HZT29_22815) | 87416..87646 | - | 231 | Protein_97 | IS1 family transposase IS1A | Transposase |
| HZT29_RS23040 (HZT29_22820) | 87697..88401 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT29_RS23045 (HZT29_22825) | 88474..88692 | + | 219 | Protein_99 | IS1 family transposase IS1X2 | Transposase |
| HZT29_RS23050 (HZT29_22830) | 89110..89397 | - | 288 | WP_033544594.1 | hypothetical protein | - |
| HZT29_RS23055 (HZT29_22835) | 89407..90933 | - | 1527 | WP_275092305.1 | AAA family ATPase | - |
| HZT29_RS23060 (HZT29_22840) | 91096..92673 | - | 1578 | WP_240765051.1 | Aerotaxis receptor | VF |
| HZT29_RS23065 (HZT29_22845) | 92983..93543 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HZT29_RS23070 (HZT29_22850) | 93547..93918 | + | 372 | Protein_104 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZT29_RS23075 (HZT29_22855) | 93898..94143 | + | 246 | WP_240765060.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZT29_RS23080 (HZT29_22860) | 94175..94825 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZT29_RS23085 (HZT29_22865) | 94931..96129 | + | 1199 | Protein_107 | Tetracycline resistance protein, class C | ARG |
| HZT29_RS23090 (HZT29_22870) | 96096..96284 | - | 189 | Protein_108 | IS91 family transposase | - |
| HZT29_RS23095 (HZT29_22875) | 96396..96701 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HZT29_RS23100 (HZT29_22880) | 96729..97941 | - | 1213 | Protein_110 | Multidrug resistance protein MdtL | ARG |
| HZT29_RS23105 (HZT29_22885) | 98158..99045 | - | 888 | WP_240765053.1 | DUF3363 domain-containing protein | - |
| HZT29_RS23110 (HZT29_22890) | 99076..100568 | - | 1493 | Protein_112 | IS91 family transposase ISVsa3 | Transposase |
| HZT29_RS23115 (HZT29_22895) | 100779..101003 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| HZT29_RS23120 (HZT29_22900) | 101000..101737 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZT29_RS23125 (HZT29_22905) | 102223..102363 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| HZT29_RS23130 (HZT29_22910) | 102369..103073 | - | 705 | WP_196315549.1 | IS6 family transposase IS26 | Transposase |
| HZT29_RS23135 (HZT29_22915) | 103064..104338 | + | 1275 | WP_223677209.1 | HAMP domain-containing methyl-accepting chemotaxis protein | - |
| HZT29_RS23140 (HZT29_22920) | 104528..105595 | + | 1068 | Protein_118 | cellulose biosynthesis protein BcsG | - |
| HZT29_RS23145 (HZT29_22925) | 105703..106704 | - | 1002 | WP_002921526.1 | glycosyl hydrolase family 8 | - |
| HZT29_RS23150 (HZT29_22930) | 106716..107192 | - | 477 | WP_002921529.1 | cellulose biosynthesis protein BcsD | - |
| HZT29_RS23155 (HZT29_22935) | 107192..111244 | - | 4053 | WP_023284374.1 | cellulose biosynthesis protein BcsC | - |
| HZT29_RS23160 (HZT29_22940) | 111241..113676 | - | 2436 | WP_004215309.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| HZT29_RS23165 (HZT29_22945) | 113673..115784 | - | 2112 | WP_240765055.1 | UDP-forming cellulose synthase catalytic subunit | - |
| HZT29_RS23170 (HZT29_22950) | 115804..116596 | - | 793 | Protein_124 | Cellulose biosynthesis protein BcsQ | VF |
| HZT29_RS23175 (HZT29_22955) | 116598..117137 | - | 540 | WP_033545677.1 | cellulose biosynthesis protein BcsO | - |
| HZT29_RS23180 (HZT29_22960) | 117348..118328 | - | 981 | WP_000082736.1 | IS5 family transposase ISEc68 | Transposase |
| HZT29_RS23185 (HZT29_22965) | 118535..118816 | + | 282 | WP_021312774.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HZT29_RS23190 (HZT29_22970) | 118816..119118 | + | 303 | WP_001698908.1 | HigA family addiction module antitoxin | - |
| HZT29_RS23195 (HZT29_22975) | 119755..120723 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| HZT29_RS23200 (HZT29_22980) | 120756..121310 | - | 555 | Protein_130 | IS30 family transposase IS30D | Transposase |
| HZT29_RS23205 (HZT29_22985) | 121378..121665 | - | 288 | Protein_131 | IS3 family transposase ISEc52 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|