MGE detailed information
MGE type: Genomic_island MGE length: 11570 bp
Accession: NZ_CP058853 Location: 3817671..3829240 Organism: Shigella flexneri strain STLEFF_38 Replicon: chromosome
Accession: NZ_CP058853 Location: 3817671..3829240 Organism: Shigella flexneri strain STLEFF_38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT29_RS18425 (3813996) | 3813996..3815204 | - | 1209 | WP_001295545.1 | propionate kinase | - |
| HZT29_RS18430 (3815230) | 3815230..3816561 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HZT29_RS18435 (3816583) | 3816583..3817572 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HZT29_RS18440 (3817671) | 3817671..3818609 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HZT29_RS18445 (3818924) | 3818924..3819142 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| HZT29_RS18450 (3819398) | 3819398..3819937 | + | 540 | WP_000675733.1 | protein YhaB | - |
| HZT29_RS18455 (3819959) | 3819959..3821147 | + | 1189 | Protein_3616 | YhaC family protein | - |
| HZT29_RS18465 (3822064) | 3822064..3823209 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| HZT29_RS18470 (3823306) | 3823306..3824196 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HZT29_RS18475 (3824226) | 3824226..3824996 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HZT29_RS18480 (3825012) | 3825012..3826346 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HZT29_RS18485 (3826721) | 3826721..3828292 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| HZT29_RS18490 (3828441) | 3828441..3828776 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HZT29_RS18495 (3828776) | 3828776..3829240 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HZT29_RS18500 (3829295) | 3829295..3830104 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HZT29_RS18505 (3830353) | 3830353..3831633 | + | 1281 | WP_000681905.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HZT29_RS18510 (3831656) | 3831656..3832129 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HZT29_RS18515 (3832140) | 3832140..3832919 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HZT29_RS18520 (3832909) | 3832909..3833787 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HZT29_RS18525 (3833805) | 3833805..3834239 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|