MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP058853 Location: 1917102..1918082 Organism: Shigella flexneri strain STLEFF_38 Replicon: chromosome
Accession: NZ_CP058853 Location: 1917102..1918082 Organism: Shigella flexneri strain STLEFF_38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT29_RS23530 (1912781) | 1912781..1912954 | + | 174 | WP_001296046.1 | protein YnaL | - |
| HZT29_RS09215 (1912984) | 1912984..1914357 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| HZT29_RS09220 (1914486) | 1914486..1915421 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HZT29_RS09225 (1915473) | 1915473..1916708 | - | 1236 | WP_000040843.1 | site-specific integrase | - |
| HZT29_RS09230 (1916710) | 1916710..1916925 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| HZT29_RS09235 (1917102) | 1917102..1918082 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| - (1918228) | 1918228..1918406 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1918228) | 1918228..1918406 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1918228) | 1918228..1918406 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1918228) | 1918228..1918406 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HZT29_RS09240 (1918224) | 1918224..1918412 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| HZT29_RS09245 (1918405) | 1918405..1918599 | - | 195 | WP_072130784.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HZT29_RS09250 (1918656) | 1918656..1919489 | - | 834 | WP_000166322.1 | recombination protein RecT | - |
| HZT29_RS09255 (1919482) | 1919482..1922082 | - | 2601 | WP_239637371.1 | exodeoxyribonuclease VIII | - |
| HZT29_RS09260 (1922184) | 1922184..1922459 | - | 276 | WP_000632297.1 | protein RacC | - |
| HZT29_RS09265 (1922534) | 1922534..1922704 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| HZT29_RS09270 (1922704) | 1922704..1922925 | - | 222 | WP_000560223.1 | killing protein KilR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|