MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85837 bp
Accession: NZ_CP058847 Location: 1..85837 Organism: Shigella flexneri strain STLEFF_35 Replicon: plasmid unnamed1
Accession: NZ_CP058847 Location: 1..85837 Organism: Shigella flexneri strain STLEFF_35 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT27_RS23140 (HZT27_22905) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HZT27_RS23145 (HZT27_22910) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| HZT27_RS23150 (HZT27_22915) | 2124..2312 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| HZT27_RS23155 (HZT27_22920) | 2686..3588 | - | 903 | WP_001312822.1 | antimicrobial resistance protein Mig-14 | - |
| HZT27_RS23160 (HZT27_22925) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| HZT27_RS23165 (HZT27_22930) | 5199..6152 | - | 954 | WP_000280980.1 | omptin family outer membrane protease | - |
| HZT27_RS23170 (HZT27_22935) | 6256..6645 | + | 390 | WP_001332050.1 | outer membrane protease | - |
| HZT27_RS23175 (HZT27_22940) | 7449..7628 | - | 180 | Protein_7 | integrase core domain-containing protein | - |
| HZT27_RS23180 (HZT27_22945) | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase | - |
| HZT27_RS23185 (HZT27_22950) | 9128..9396 | - | 269 | Protein_9 | integrase core domain-containing protein | - |
| HZT27_RS23190 (HZT27_22955) | 9453..10150 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| HZT27_RS23195 (HZT27_22960) | 10346..11137 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| HZT27_RS23200 (HZT27_22965) | 11134..11823 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| HZT27_RS23205 (HZT27_22970) | 11867..12217 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| HZT27_RS23210 (HZT27_22975) | 12762..13850 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| HZT27_RS23215 (HZT27_22980) | 13852..16077 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| HZT27_RS23220 (HZT27_22985) | 16127..17026 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| HZT27_RS23225 (HZT27_22990) | 17016..17306 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| HZT27_RS23230 (HZT27_22995) | 17636..17866 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HZT27_RS23235 (HZT27_23000) | 17863..18279 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZT27_RS23240 (HZT27_23005) | 18441..20579 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| HZT27_RS23245 (HZT27_23010) | 20933..21190 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| HZT27_RS23250 (HZT27_23015) | 21190..21780 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| HZT27_RS23255 (HZT27_23020) | 22043..23599 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| HZT27_RS23260 (HZT27_23025) | 23791..24408 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| HZT27_RS23265 (HZT27_23030) | 24701..25780 | - | 1080 | WP_001089727.1 | permease | - |
| HZT27_RS23270 (HZT27_23035) | 25885..26208 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HZT27_RS23275 (HZT27_23040) | 26369..26689 | + | 321 | Protein_27 | NAD(P)H-dependent oxidoreductase | - |
| HZT27_RS23280 (HZT27_23045) | 26742..27446 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZT27_RS23285 (HZT27_23050) | 27516..27989 | - | 474 | WP_004201280.1 | trimethoprim-resistant dihydrofolate reductase DfrA14 | - |
| HZT27_RS23290 (HZT27_23055) | 28145..29158 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| HZT27_RS23295 (HZT27_23060) | 29606..30310 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZT27_RS23300 (HZT27_23065) | 30376..30660 | + | 285 | Protein_32 | IS6-like element IS26 family transposase | - |
| HZT27_RS23305 (HZT27_23070) | 30850..31665 | - | 816 | WP_000018329.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| HZT27_RS23310 (HZT27_23075) | 31816..32520 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZT27_RS23315 (HZT27_23080) | 32942..33817 | + | 876 | WP_015387340.1 | extended-spectrum class A beta-lactamase CTX-M-55 | - |
| HZT27_RS23320 (HZT27_23085) | 33864..34340 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| HZT27_RS23325 (HZT27_23090) | 34599..35342 | - | 744 | Protein_37 | class A beta-lactamase | - |
| HZT27_RS23330 (HZT27_23095) | 35392..36096 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZT27_RS23335 (HZT27_23100) | 36558..37142 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| HZT27_RS23340 (HZT27_23105) | 37142..38380 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| HZT27_RS23345 (HZT27_23110) | 38377..39282 | - | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| HZT27_RS23350 (HZT27_23115) | 39404..40108 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZT27_RS23355 (HZT27_23120) | 40173..40337 | + | 165 | Protein_43 | resolvase | - |
| HZT27_RS23360 (HZT27_23125) | 40334..40558 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| HZT27_RS23365 (HZT27_23130) | 40769..42262 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| HZT27_RS23370 (HZT27_23135) | 42293..43177 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HZT27_RS23375 (HZT27_23140) | 43394..44608 | + | 1215 | WP_000214121.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| HZT27_RS23380 (HZT27_23145) | 44636..44941 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| HZT27_RS23385 (HZT27_23150) | 45053..45241 | + | 189 | Protein_49 | IS91 family transposase | - |
| HZT27_RS23390 (HZT27_23155) | 45208..46407 | - | 1200 | WP_032153701.1 | tetracycline efflux MFS transporter Tet(A) | - |
| HZT27_RS23395 (HZT27_23160) | 46513..47163 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZT27_RS23400 (HZT27_23165) | 47195..47437 | - | 243 | WP_000844627.1 | transposase | - |
| HZT27_RS23405 (HZT27_23170) | 47743..48579 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| HZT27_RS23410 (HZT27_23175) | 48579..49382 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| HZT27_RS23415 (HZT27_23180) | 49443..50258 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HZT27_RS23420 (HZT27_23185) | 50420..51280 | - | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| HZT27_RS23425 (HZT27_23190) | 51520..52224 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZT27_RS23430 (HZT27_23195) | 52279..52704 | + | 426 | Protein_58 | TetR/AcrR family transcriptional regulator | - |
| HZT27_RS23435 (HZT27_23200) | 52724..53512 | + | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| HZT27_RS23440 (HZT27_23205) | 53512..54030 | + | 519 | WP_014839979.1 | FidL-like protein | - |
| HZT27_RS23445 (HZT27_23210) | 54035..54451 | - | 417 | WP_014839980.1 | fosfomycin resistance glutathione transferase FosA3 | - |
| HZT27_RS23450 (HZT27_23215) | 54837..55541 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZT27_RS23455 (HZT27_23220) | 55607..56152 | + | 546 | Protein_63 | Tn3 family transposase | - |
| HZT27_RS23460 (HZT27_23225) | 56188..56603 | - | 416 | Protein_64 | IS1-like element IS1B family transposase | - |
| HZT27_RS23465 (HZT27_23230) | 56852..57253 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HZT27_RS23470 (HZT27_23235) | 57186..57443 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HZT27_RS23475 (HZT27_23240) | 57536..58189 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HZT27_RS23480 (HZT27_23245) | 59129..59431 | - | 303 | Protein_68 | incFII family plasmid replication initiator RepA | - |
| HZT27_RS23485 (HZT27_23250) | 59428..59571 | - | 144 | Protein_69 | hypothetical protein | - |
| HZT27_RS23490 (HZT27_23255) | 59609..59818 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| HZT27_RS23495 (HZT27_23260) | 59864..60325 | - | 462 | WP_001233871.1 | thermonuclease family protein | - |
| HZT27_RS23500 (HZT27_23265) | 60568..60780 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| HZT27_RS23505 (HZT27_23270) | 60918..61478 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| HZT27_RS23510 (HZT27_23275) | 61533..62279 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| HZT27_RS23515 (HZT27_23280) | 62299..65550 | - | 3252 | Protein_75 | conjugative transfer relaxase/helicase TraI | - |
| HZT27_RS23520 (HZT27_23285) | 65558..65977 | - | 420 | Protein_76 | type-F conjugative transfer system secretin TraK | - |
| HZT27_RS23525 (HZT27_23290) | 66127..66306 | - | 180 | Protein_77 | hypothetical protein | - |
| HZT27_RS23530 (HZT27_23295) | 66306..66731 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| HZT27_RS23535 (HZT27_23300) | 67133..68104 | + | 972 | WP_000082154.1 | IS110-like element ISEc32 family transposase | - |
| HZT27_RS23545 (HZT27_23310) | 68905..69240 | - | 336 | WP_000343070.1 | hypothetical protein | - |
| HZT27_RS23550 (HZT27_23315) | 69309..69656 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| HZT27_RS23555 | 69653..69822 | - | 170 | Protein_83 | hypothetical protein | - |
| HZT27_RS23560 (HZT27_23320) | 70416..71387 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HZT27_RS23565 (HZT27_23325) | 71387..72553 | - | 1167 | WP_001238646.1 | plasmid-partitioning protein SopA | - |
| HZT27_RS23575 (HZT27_23335) | 73706..75208 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| HZT27_RS23580 (HZT27_23340) | 75816..76241 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| HZT27_RS23585 (HZT27_23345) | 76383..76862 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| HZT27_RS23590 (HZT27_23350) | 77302..77553 | + | 252 | WP_000163248.1 | hypothetical protein | - |
| HZT27_RS23595 (HZT27_23355) | 77526..77657 | - | 132 | Protein_91 | phosphopyruvate hydratase | - |
| HZT27_RS23600 (HZT27_23360) | 77655..77912 | + | 258 | Protein_92 | Tn3 family transposase | - |
| HZT27_RS23605 (HZT27_23365) | 78146..79003 | - | 858 | WP_000968140.1 | iron/manganese ABC transporter permease subunit SitD | - |
| HZT27_RS23610 (HZT27_23370) | 79000..79857 | - | 858 | WP_000992806.1 | iron/manganese ABC transporter permease subunit SitC | - |
| HZT27_RS23615 (HZT27_23375) | 79854..80681 | - | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| HZT27_RS23620 (HZT27_23380) | 80681..81595 | - | 915 | WP_000949004.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| HZT27_RS23625 (HZT27_23385) | 81951..82648 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| HZT27_RS23630 (HZT27_23390) | 82828..83341 | - | 514 | Protein_98 | DUF4113 domain-containing protein | - |
| HZT27_RS23635 (HZT27_23395) | 83402..83506 | - | 105 | Protein_99 | AAA family ATPase | - |
| HZT27_RS23640 (HZT27_23400) | 83508..83831 | - | 324 | Protein_100 | helix-turn-helix domain-containing protein | - |
| HZT27_RS23645 (HZT27_23405) | 84080..85293 | + | 1214 | WP_085947772.1 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|