MGE detailed information
MGE type: Genomic_island MGE length: 15771 bp
Accession: NZ_CP058846 Location: 2066884..2082654 Organism: Shigella flexneri strain STLEFF_35 Replicon: chromosome
Accession: NZ_CP058846 Location: 2066884..2082654 Organism: Shigella flexneri strain STLEFF_35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT27_RS09905 (2063699) | 2063699..2065384 | - | 1686 | WP_000628581.1 | ABC transporter ATP-binding protein/permease | - |
| HZT27_RS09910 (2065587) | 2065587..2065709 | + | 123 | WP_120795387.1 | protein YneP | - |
| HZT27_RS09915 (2065675) | 2065675..2066832 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| HZT27_RS09920 (2066884) | 2066884..2068566 | - | 1683 | WP_001318307.1 | sulfatase | - |
| HZT27_RS09925 (2068777) | 2068777..2069474 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| HZT27_RS09930 (2069745) | 2069745..2070506 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| HZT27_RS09935 (2070581) | 2070581..2070778 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| HZT27_RS09940 (2071026) | 2071026..2073305 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| HZT27_RS09945 (2073639) | 2073639..2074553 | - | 915 | WP_000520676.1 | fimbrial protein | - |
| HZT27_RS09950 (2074612) | 2074612..2075115 | - | 504 | WP_000825452.1 | fimbrial protein | - |
| HZT27_RS09955 (2075128) | 2075128..2075658 | - | 531 | WP_000876763.1 | fimbrial protein | - |
| HZT27_RS09960 (2075672) | 2075672..2078208 | - | 2537 | Protein_1944 | fimbrial biogenesis outer membrane usher protein | - |
| HZT27_RS09970 (2079141) | 2079141..2079851 | - | 711 | WP_001195166.1 | fimbria/pilus periplasmic chaperone | - |
| HZT27_RS09975 (2080212) | 2080212..2080694 | - | 483 | WP_000931227.1 | fimbrial protein | - |
| HZT27_RS09980 (2081066) | 2081066..2082388 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HZT27_RS09985 (2082388) | 2082388..2082654 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HZT27_RS09990 (2082877) | 2082877..2084457 | - | 1581 | Protein_1950 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HZT27_RS09995 (2084453) | 2084453..2085229 | + | 777 | Protein_1951 | histidine kinase | - |
| HZT27_RS10000 (2085241) | 2085241..2086263 | + | 1023 | WP_240767121.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| HZT27_RS10005 (2086290) | 2086290..2087165 | + | 876 | WP_000774188.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| HZT27_RS10010 (2087189) | 2087189..2087479 | + | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|