MGE detailed information
MGE type: Prophage MGE length: 20193 bp
Accession: NZ_CP058846 Location: 1910755..1930947 Organism: Shigella flexneri strain STLEFF_35 Replicon: chromosome
Accession: NZ_CP058846 Location: 1910755..1930947 Organism: Shigella flexneri strain STLEFF_35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT27_RS09185 (1906744) | 1906744..1906791 | + | 48 | WP_211180494.1 | protein YnaN | - |
| HZT27_RS09190 (1906805) | 1906805..1907788 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| HZT27_RS24045 (1908063) | 1908063..1908236 | + | 174 | WP_001296046.1 | protein YnaL | - |
| HZT27_RS09195 (1908266) | 1908266..1909639 | + | 1374 | WP_134234849.1 | ATP-dependent RNA helicase DbpA | - |
| HZT27_RS09200 (1909768) | 1909768..1910703 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HZT27_RS09205 (1910755) | 1910755..1911990 | - | 1236 | WP_000040842.1 | site-specific integrase | - |
| HZT27_RS09210 (1911992) | 1911992..1912207 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1912311) | 1912311..1912489 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1912311) | 1912311..1912489 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1912311) | 1912311..1912489 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1912311) | 1912311..1912489 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HZT27_RS09215 (1912307) | 1912307..1912495 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| HZT27_RS09220 (1912488) | 1912488..1912682 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HZT27_RS09225 (1912739) | 1912739..1913548 | - | 810 | WP_134234848.1 | recombination protein RecT | - |
| HZT27_RS09230 (1913541) | 1913541..1916141 | - | 2601 | WP_240767107.1 | exodeoxyribonuclease VIII | - |
| HZT27_RS09235 (1916243) | 1916243..1916518 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| HZT27_RS09240 (1916593) | 1916593..1916763 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| HZT27_RS09245 (1916763) | 1916763..1916984 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| HZT27_RS09250 (1917426) | 1917426..1917914 | + | 489 | WP_045145128.1 | superinfection exclusion B family protein | - |
| HZT27_RS09255 (1917911) | 1917911..1918066 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| HZT27_RS24050 (1918078) | 1918078..1918212 | - | 135 | WP_000233813.1 | hypothetical protein | - |
| HZT27_RS09260 (1918515) | 1918515..1918934 | - | 420 | WP_000410102.1 | helix-turn-helix domain-containing protein | - |
| HZT27_RS09265 (1919031) | 1919031..1919273 | + | 243 | WP_045145116.1 | helix-turn-helix transcriptional regulator | - |
| HZT27_RS09270 (1919270) | 1919270..1919692 | + | 423 | WP_045145118.1 | toxin YdaT family protein | - |
| HZT27_RS09275 (1919902) | 1919902..1920435 | + | 534 | WP_000992105.1 | lysozyme | - |
| HZT27_RS09280 (1920432) | 1920432..1920896 | + | 465 | WP_000091919.1 | lysis protein | - |
| HZT27_RS09285 (1921034) | 1921034..1922491 | + | 1458 | WP_001097897.1 | Trk system potassium transporter TrkG | - |
| HZT27_RS09290 (1922629) | 1922629..1923417 | + | 789 | WP_001291102.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HZT27_RS09295 (1923499) | 1923499..1924344 | + | 846 | Protein_1811 | terminase small subunit | - |
| HZT27_RS09300 (1924325) | 1924325..1925626 | + | 1302 | WP_240767108.1 | terminase family protein | - |
| HZT27_RS09305 (1925629) | 1925629..1926879 | + | 1251 | Protein_1813 | DUF4055 domain-containing protein | - |
| HZT27_RS09310 (1927125) | 1927125..1930196 | + | 3072 | Protein_1814 | phage tail tape measure protein | - |
| HZT27_RS09315 (1930250) | 1930250..1930947 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| HZT27_RS09320 (1931076) | 1931076..1931810 | + | 735 | WP_240767109.1 | hypothetical protein | - |
| HZT27_RS09325 (1931810) | 1931810..1932091 | + | 282 | WP_139506559.1 | hypothetical protein | - |
| HZT27_RS09330 (1932101) | 1932101..1932805 | + | 705 | WP_240767110.1 | tail fiber domain-containing protein | - |
| HZT27_RS09335 (1932816) | 1932816..1933109 | + | 294 | WP_105929184.1 | hypothetical protein | - |
| HZT27_RS09340 (1933129) | 1933129..1933248 | + | 120 | Protein_1820 | tail fiber assembly protein | - |
| HZT27_RS09345 (1933461) | 1933461..1934318 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| HZT27_RS09350 (1934315) | 1934315..1935172 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|