MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39202 bp
Accession: NZ_CP058842 Location: 1..39202 Organism: Shigella flexneri strain STLEFF_34 Replicon: plasmid unnamed3
Accession: NZ_CP058842 Location: 1..39202 Organism: Shigella flexneri strain STLEFF_34 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT26_RS24345 (HZT26_24150) | 554..1189 | + | 636 | WP_000677445.1 | hypothetical protein | VF |
| HZT26_RS24350 (HZT26_24155) | 1270..1966 | + | 697 | Protein_2 | IS1-like element IS1A family transposase | - |
| HZT26_RS24805 | 2458..2541 | + | 84 | WP_272056275.1 | DinQ-like type I toxin DqlB | - |
| HZT26_RS24810 | 3102..3197 | + | 96 | WP_000609146.1 | DinQ-like type I toxin DqlB | - |
| HZT26_RS24355 (HZT26_24160) | 3264..3443 | + | 180 | WP_012291479.1 | hypothetical protein | - |
| HZT26_RS24360 (HZT26_24165) | 3559..4203 | - | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZT26_RS24365 (HZT26_24170) | 4489..5109 | + | 621 | WP_000864791.1 | ParA family protein | - |
| HZT26_RS24370 (HZT26_24175) | 5161..5391 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| HZT26_RS24375 (HZT26_24180) | 5407..5700 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| HZT26_RS24380 (HZT26_24185) | 5702..6670 | + | 969 | WP_031942372.1 | IS5 family transposase IS903B | Transposase |
| HZT26_RS24385 (HZT26_24190) | 6730..7083 | - | 354 | WP_240763296.1 | DNA distortion polypeptide 3 | - |
| HZT26_RS24390 (HZT26_24195) | 7220..7666 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| HZT26_RS24395 (HZT26_24200) | 7706..8542 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| HZT26_RS24400 (HZT26_24205) | 9776..10027 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HZT26_RS24405 (HZT26_24210) | 10017..10298 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HZT26_RS24410 (HZT26_24215) | 10444..10767 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| HZT26_RS24415 (HZT26_24220) | 10812..11057 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| HZT26_RS24420 (HZT26_24225) | 11047..11262 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| HZT26_RS24425 (HZT26_24230) | 11355..11684 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| HZT26_RS24430 (HZT26_24235) | 11727..11906 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| HZT26_RS24435 (HZT26_24240) | 11976..12125 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| HZT26_RS24440 (HZT26_24245) | 12138..12410 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| HZT26_RS24445 (HZT26_24255) | 12736..13281 | + | 546 | WP_015060502.1 | DNA distortion polypeptide 1 | - |
| HZT26_RS24450 (HZT26_24260) | 13284..14450 | + | 1167 | WP_000539530.1 | hypothetical protein | Relaxase |
| HZT26_RS24455 (HZT26_24265) | 14796..15314 | + | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| HZT26_RS24460 (HZT26_24270) | 15244..15456 | + | 213 | WP_032312290.1 | hypothetical protein | - |
| HZT26_RS24465 (HZT26_24275) | 15489..16136 | + | 648 | WP_000953529.1 | Type IV secretion system protein virB1 | VF |
| HZT26_RS24470 (HZT26_24280) | 16114..16410 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| HZT26_RS24475 | 16429..16617 | + | 189 | Protein_29 | Type IV secretion system protein virB4 | VF |
| HZT26_RS24480 (HZT26_24285) | 17188..19182 | + | 1995 | WP_072107035.1 | Type IV secretion system protein virB4 | VF |
| HZT26_RS24485 (HZT26_24290) | 19193..19942 | + | 750 | WP_000744202.1 | type IV secretion system protein | - |
| HZT26_RS24490 (HZT26_24295) | 19957..20241 | + | 285 | WP_000748128.1 | EexN family lipoprotein | - |
| HZT26_RS24495 (HZT26_24300) | 20253..21314 | + | 1062 | WP_000796673.1 | hypothetical protein | VF |
| HZT26_RS24500 | 21441..21569 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| HZT26_RS24505 (HZT26_24305) | 21559..22272 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| HZT26_RS24510 (HZT26_24310) | 22277..23206 | + | 930 | WP_000783379.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HZT26_RS24515 (HZT26_24315) | 23203..24408 | + | 1206 | WP_000139139.1 | Type IV secretion system protein virB10 | VF |
| HZT26_RS24520 (HZT26_24320) | 24410..25441 | + | 1032 | WP_001058463.1 | Type IV secretion system protein VirB11 | VF |
| HZT26_RS24525 (HZT26_24325) | 25444..27279 | + | 1836 | WP_031942379.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HZT26_RS24530 (HZT26_24330) | 27276..27689 | + | 414 | WP_031942378.1 | cag pathogenicity island Cag12 family protein | - |
| HZT26_RS24535 (HZT26_24335) | 27686..27988 | + | 303 | WP_000717624.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HZT26_RS24540 (HZT26_24340) | 28103..29026 | - | 924 | WP_031942377.1 | SMEK domain-containing protein | - |
| HZT26_RS24545 (HZT26_24345) | 29162..31315 | + | 2154 | WP_031942376.1 | type IA DNA topoisomerase | - |
| HZT26_RS24550 (HZT26_24350) | 31312..31518 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| HZT26_RS24555 (HZT26_24355) | 31534..31968 | + | 435 | WP_001293129.1 | H-NS family nucleoid-associated regulatory protein | - |
| HZT26_RS24560 (HZT26_24360) | 32237..32611 | - | 375 | WP_031942366.1 | EAL domain-containing protein | - |
| HZT26_RS24570 (HZT26_24370) | 33626..34606 | + | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| HZT26_RS24575 (HZT26_24375) | 34853..35461 | + | 609 | WP_002916128.1 | hypothetical protein | VF |
| HZT26_RS24580 (HZT26_24380) | 35557..36258 | + | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| HZT26_RS24585 (HZT26_24385) | 36270..38756 | + | 2487 | WP_000813718.1 | Outer membrane usher protein HtrE | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|