MGE detailed information
MGE type: Prophage MGE length: 27707 bp
Accession: NZ_CP058839 Location: 701151..728857 Organism: Shigella flexneri strain STLEFF_34 Replicon: chromosome
Accession: NZ_CP058839 Location: 701151..728857 Organism: Shigella flexneri strain STLEFF_34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT26_RS03440 (697666) | 697666..698412 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| HZT26_RS03445 (698501) | 698501..699187 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| HZT26_RS03450 (699364) | 699364..699567 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HZT26_RS03455 (699602) | 699602..701062 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| HZT26_RS03460 (701151) | 701151..702518 | - | 1368 | Protein_684 | MHS family MFS transporter | - |
| HZT26_RS03465 (703039) | 703039..703152 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HZT26_RS03470 (703221) | 703221..703454 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HZT26_RS03475 (703771) | 703771..704361 | + | 591 | WP_000078177.1 | recombinase family protein | - |
| HZT26_RS03480 (704459) | 704459..705034 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| HZT26_RS03485 (705034) | 705034..706839 | - | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| HZT26_RS03490 (706814) | 706814..707359 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HZT26_RS03495 (707748) | 707748..707981 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HZT26_RS03500 (708039) | 708039..708449 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HZT26_RS03505 (708601) | 708601..708774 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HZT26_RS03510 (708946) | 708946..709176 | - | 231 | WP_000720962.1 | protein YnfN | - |
| HZT26_RS03515 (709181) | 709181..709246 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| HZT26_RS03520 (709249) | 709249..709437 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| HZT26_RS03525 (709448) | 709448..709660 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HZT26_RS03530 (710023) | 710023..710520 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HZT26_RS03535 (710517) | 710517..711050 | - | 534 | WP_001092971.1 | lysozyme | - |
| HZT26_RS03540 (711047) | 711047..711358 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| HZT26_RS03545 (711363) | 711363..711578 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HZT26_RS03550 (711798) | 711798..711968 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| HZT26_RS03555 (712332) | 712332..712547 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HZT26_RS03560 (712848) | 712848..713060 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HZT26_RS03565 (713115) | 713115..713204 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| HZT26_RS03570 (713482) | 713482..714234 | - | 753 | WP_001047135.1 | antitermination protein | - |
| HZT26_RS03575 (714248) | 714248..715297 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| HZT26_RS03580 (715299) | 715299..715577 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| HZT26_RS03585 (715644) | 715644..715895 | - | 252 | WP_000980994.1 | protein Rem | - |
| HZT26_RS03590 (716112) | 716112..716267 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HZT26_RS03595 (716339) | 716339..716626 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HZT26_RS03600 (716626) | 716626..716865 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HZT26_RS03605 (716890) | 716890..717195 | + | 306 | WP_001326990.1 | protein YdfV | - |
| HZT26_RS03610 (717398) | 717398..717730 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| HZT26_RS03615 (718167) | 718167..719480 | - | 1314 | WP_000589005.1 | ISNCY family transposase | - |
| HZT26_RS03620 (720249) | 720249..720536 | - | 288 | Protein_716 | hypothetical protein | - |
| HZT26_RS03625 (720779) | 720779..720901 | + | 123 | Protein_717 | transposase | - |
| HZT26_RS03630 (720907) | 720907..721137 | + | 231 | Protein_718 | IS66 family insertion sequence element accessory protein TnpB | - |
| HZT26_RS03635 (721186) | 721186..722725 | + | 1540 | Protein_719 | IS66-like element ISEc22 family transposase | - |
| HZT26_RS03640 (723108) | 723108..723597 | - | 490 | Protein_720 | class I SAM-dependent methyltransferase | - |
| HZT26_RS03645 (723594) | 723594..724016 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| HZT26_RS03650 (724057) | 724057..724314 | - | 258 | Protein_722 | hypothetical protein | - |
| HZT26_RS03655 (724302) | 724302..726011 | + | 1710 | Protein_723 | 3'-5' exoribonuclease | - |
| HZT26_RS03660 (726084) | 726084..726335 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| HZT26_RS03665 (726370) | 726370..727650 | + | 1281 | WP_000876958.1 | site-specific integrase | - |
| HZT26_RS03670 (727838) | 727838..728857 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| HZT26_RS03675 (728869) | 728869..730083 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HZT26_RS03680 (730289) | 730289..730615 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| HZT26_RS03685 (730750) | 730750..731091 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HZT26_RS03690 (731126) | 731126..731686 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HZT26_RS03695 (731689) | 731689..732399 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HZT26_RS03700 (732507) | 732507..732812 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|