MGE detailed information
MGE type: Prophage MGE length: 40818 bp
Accession: NZ_CP058831 Location: 2179424..2220241 Organism: Shigella flexneri strain STLE4 Replicon: chromosome
Accession: NZ_CP058831 Location: 2179424..2220241 Organism: Shigella flexneri strain STLE4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT21_RS10495 (2175323) | 2175323..2176543 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| HZT21_RS10500 (2176668) | 2176668..2177363 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| HZT21_RS10505 (2177316) | 2177316..2178608 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HZT21_RS10510 (2178767) | 2178767..2179381 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HZT21_RS10515 (2179424) | 2179424..2180278 | - | 855 | WP_049254808.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| HZT21_RS10520 (2180280) | 2180280..2180897 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| HZT21_RS10525 (2180908) | 2180908..2183331 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| HZT21_RS10530 (2183392) | 2183392..2185818 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| HZT21_RS10535 (2186017) | 2186017..2186322 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| HZT21_RS10540 (2186430) | 2186430..2187140 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HZT21_RS10545 (2187143) | 2187143..2187703 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HZT21_RS10550 (2187738) | 2187738..2188079 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HZT21_RS10555 (2188214) | 2188214..2188540 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| HZT21_RS10560 (2188746) | 2188746..2189960 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HZT21_RS10565 (2189972) | 2189972..2190991 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| HZT21_RS10570 (2191179) | 2191179..2192459 | - | 1281 | WP_000876958.1 | site-specific integrase | - |
| HZT21_RS10575 (2192494) | 2192494..2192745 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| HZT21_RS10580 (2192818) | 2192818..2194527 | - | 1710 | Protein_2074 | 3'-5' exoribonuclease | - |
| HZT21_RS10585 (2194515) | 2194515..2194772 | + | 258 | Protein_2075 | hypothetical protein | - |
| HZT21_RS10590 (2194813) | 2194813..2195235 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| HZT21_RS10595 (2195232) | 2195232..2195721 | + | 490 | Protein_2077 | class I SAM-dependent methyltransferase | - |
| HZT21_RS10600 (2196104) | 2196104..2197643 | - | 1540 | Protein_2078 | IS66-like element ISEc22 family transposase | - |
| HZT21_RS10605 (2197692) | 2197692..2197922 | - | 231 | Protein_2079 | IS66 family insertion sequence element accessory protein TnpB | - |
| HZT21_RS10610 (2197928) | 2197928..2198050 | - | 123 | Protein_2080 | transposase | - |
| HZT21_RS10620 (2199204) | 2199204..2199490 | + | 287 | Protein_2082 | hypothetical protein | - |
| HZT21_RS10625 (2200125) | 2200125..2201438 | + | 1314 | WP_000589005.1 | ISNCY family transposase | - |
| HZT21_RS10630 (2201875) | 2201875..2202207 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| HZT21_RS10635 (2202410) | 2202410..2202715 | - | 306 | WP_001326990.1 | protein YdfV | - |
| HZT21_RS10640 (2202740) | 2202740..2202979 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HZT21_RS10645 (2202979) | 2202979..2203266 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HZT21_RS10650 (2203338) | 2203338..2203493 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HZT21_RS10655 (2203710) | 2203710..2203961 | + | 252 | WP_000980994.1 | protein Rem | - |
| HZT21_RS10660 (2204028) | 2204028..2204306 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| HZT21_RS10665 (2204308) | 2204308..2205357 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| HZT21_RS10670 (2205371) | 2205371..2206123 | + | 753 | WP_001047135.1 | antitermination protein | - |
| HZT21_RS10675 (2206401) | 2206401..2206490 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| HZT21_RS10680 (2206545) | 2206545..2206757 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HZT21_RS10685 (2207058) | 2207058..2207273 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HZT21_RS10690 (2207637) | 2207637..2207807 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| HZT21_RS10695 (2208027) | 2208027..2208242 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HZT21_RS10700 (2208247) | 2208247..2208558 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| HZT21_RS10705 (2208555) | 2208555..2209088 | + | 534 | WP_001092971.1 | lysozyme | - |
| HZT21_RS10710 (2209085) | 2209085..2209582 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HZT21_RS10715 (2209945) | 2209945..2210157 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HZT21_RS10720 (2210168) | 2210168..2210356 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HZT21_RS10725 (2210359) | 2210359..2210424 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| HZT21_RS10730 (2210429) | 2210429..2210659 | + | 231 | WP_000720962.1 | protein YnfN | - |
| HZT21_RS10735 (2210831) | 2210831..2211004 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HZT21_RS10740 (2211156) | 2211156..2211566 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HZT21_RS10745 (2211624) | 2211624..2211857 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HZT21_RS10750 (2212246) | 2212246..2212791 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HZT21_RS10755 (2212766) | 2212766..2214571 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| HZT21_RS10760 (2214571) | 2214571..2215146 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| HZT21_RS10765 (2215244) | 2215244..2215834 | - | 591 | WP_000086514.1 | recombinase family protein | - |
| HZT21_RS10770 (2216151) | 2216151..2216384 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HZT21_RS10775 (2216453) | 2216453..2216566 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HZT21_RS10780 (2217087) | 2217087..2218454 | + | 1368 | Protein_2114 | MHS family MFS transporter | - |
| HZT21_RS10785 (2218543) | 2218543..2220003 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| HZT21_RS10790 (2220038) | 2220038..2220241 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HZT21_RS10795 (2220418) | 2220418..2221104 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| HZT21_RS10800 (2221193) | 2221193..2221939 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| HZT21_RS10805 (2222076) | 2222076..2224121 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| HZT21_RS10810 (2224165) | 2224165..2224683 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|