MGE detailed information
MGE type: Genomic_island MGE length: 20016 bp
Accession: NZ_CP058828 Location: 4099845..4119860 Organism: Shigella flexneri strain STLE3 Replicon: chromosome
Accession: NZ_CP058828 Location: 4099845..4119860 Organism: Shigella flexneri strain STLE3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT20_RS19595 (4095164) | 4095164..4096066 | - | 903 | WP_001338195.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| HZT20_RS19600 (4096086) | 4096086..4096589 | - | 504 | WP_000870589.1 | type 1 fimbria minor subunit FimG | - |
| HZT20_RS19605 (4096602) | 4096602..4097132 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| HZT20_RS19610 (4097142) | 4097142..4099778 | - | 2637 | WP_061350441.1 | fimbrial usher FimD | - |
| HZT20_RS19615 (4099845) | 4099845..4100570 | - | 726 | WP_000066568.1 | hypothetical protein | VF |
| HZT20_RS19620 (4100607) | 4100607..4101146 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| HZT20_RS19625 (4101211) | 4101211..4101765 | - | 555 | WP_000695589.1 | hypothetical protein | VF |
| HZT20_RS19630 (4102246) | 4102246..4102842 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| HZT20_RS19635 (4103319) | 4103319..4103921 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HZT20_RS19640 (4105374) | 4105374..4106090 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HZT20_RS19645 (4106110) | 4106110..4107216 | + | 1107 | WP_001299704.1 | N-acetylneuraminate epimerase | - |
| HZT20_RS19650 (4107281) | 4107281..4108261 | + | 981 | WP_061350442.1 | sialate O-acetylesterase | - |
| HZT20_RS19655 (4108371) | 4108371..4108576 | + | 206 | Protein_3860 | HNH endonuclease | - |
| HZT20_RS19660 (4108844) | 4108844..4110084 | - | 1241 | Protein_3861 | helicase YjhR | - |
| HZT20_RS19665 (4110200) | 4110200..4110331 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| HZT20_RS19670 (4110822) | 4110822..4111079 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| HZT20_RS19675 (4111091) | 4111091..4111636 | + | 546 | WP_001338189.1 | N-acetyltransferase | Antitoxin Detail |
| HZT20_RS19680 (4111692) | 4111692..4112438 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HZT20_RS19685 (4112607) | 4112607..4112825 | + | 219 | Protein_3866 | hypothetical protein | - |
| HZT20_RS19690 (4112863) | 4112863..4112979 | + | 117 | Protein_3867 | VOC family protein | - |
| HZT20_RS19695 (4113224) | 4113224..4114345 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HZT20_RS19700 (4114342) | 4114342..4114620 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| HZT20_RS19705 (4114632) | 4114632..4115945 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| HZT20_RS19710 (4115958) | 4115958..4116764 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HZT20_RS19715 (4116895) | 4116895..4117326 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| HZT20_RS19720 (4117338) | 4117338..4117970 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| HZT20_RS19725 (4117987) | 4117987..4118769 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HZT20_RS19730 (4119072) | 4119072..4119860 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| HZT20_RS19735 (4119865) | 4119865..4120770 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| HZT20_RS19740 (4120781) | 4120781..4122748 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| HZT20_RS19745 (4122855) | 4122855..4124204 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|