MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 53820 bp
Accession: NZ_CP058797 Location: 1..53820 Organism: Shigella flexneri strain STLIN_8 Replicon: plasmid unnamed1
Accession: NZ_CP058797 Location: 1..53820 Organism: Shigella flexneri strain STLIN_8 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT12_RS23455 (HZT12_23255) | 384..833 | + | 450 | WP_001282381.1 | H-NS family nucleoid-associated regulatory protein | - |
| HZT12_RS23460 (HZT12_23260) | 896..1300 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| HZT12_RS23465 (HZT12_23265) | 1455..2753 | - | 1299 | Protein_3 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HZT12_RS23470 (HZT12_23270) | 2821..3525 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT12_RS23475 (HZT12_23275) | 3578..3736 | - | 159 | Protein_5 | IS3 family transposase ISAs17 | Transposase |
| HZT12_RS23480 (HZT12_23280) | 4131..4787 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HZT12_RS23485 (HZT12_23285) | 5106..5525 | - | 420 | Protein_7 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HZT12_RS23490 (HZT12_23290) | 5577..6281 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT12_RS23495 (HZT12_23295) | 6352..7365 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HZT12_RS23500 (HZT12_23300) | 7521..7994 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| HZT12_RS23505 (HZT12_23305) | 8178..8270 | + | 93 | Protein_11 | SMR family transporter | - |
| HZT12_RS23510 (HZT12_23310) | 8323..9027 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT12_RS23515 (HZT12_23315) | 9092..9937 | + | 846 | Protein_13 | IS91 family transposase ISVsa3 | Transposase |
| HZT12_RS23520 (HZT12_23320) | 9968..10852 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HZT12_RS23525 (HZT12_23325) | 11069..12283 | + | 1215 | WP_039023559.1 | Inner membrane transport protein YdhC | ARG |
| HZT12_RS23530 (HZT12_23330) | 12311..12616 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HZT12_RS23535 (HZT12_23335) | 12728..13381 | + | 654 | Protein_17 | IS91 family transposase ISPps1 | Transposase |
| HZT12_RS23540 (HZT12_23340) | 13435..14139 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT12_RS23545 (HZT12_23345) | 14205..14705 | + | 501 | Protein_19 | Tn3 family transposase | - |
| HZT12_RS23550 (HZT12_23350) | 14763..15005 | + | 243 | WP_000844627.1 | transposase | - |
| HZT12_RS23555 (HZT12_23355) | 15037..15687 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZT12_RS23560 (HZT12_23360) | 15793..16992 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| HZT12_RS23565 (HZT12_23365) | 17024..17908 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| HZT12_RS23570 (HZT12_23370) | 18046..18438 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HZT12_RS23575 (HZT12_23375) | 18442..19203 | + | 762 | Protein_25 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZT12_RS23580 (HZT12_23380) | 19239..22244 | - | 3006 | WP_001531602.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HZT12_RS23585 (HZT12_23385) | 22408..22965 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HZT12_RS23590 (HZT12_23390) | 23148..24008 | + | 861 | WP_038976851.1 | Beta-lactamase TEM | ARG |
| HZT12_RS23595 (HZT12_23395) | 24407..25045 | - | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZT12_RS23600 (HZT12_23400) | 25331..25951 | + | 621 | WP_000864791.1 | ParA family protein | - |
| HZT12_RS23605 (HZT12_23405) | 26003..26233 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| HZT12_RS23610 (HZT12_23410) | 26249..26542 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| HZT12_RS23615 (HZT12_23415) | 26544..27512 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| HZT12_RS23620 (HZT12_23420) | 27572..27925 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| HZT12_RS23625 (HZT12_23425) | 28062..28508 | - | 447 | WP_097728302.1 | hypothetical protein | - |
| HZT12_RS23630 (HZT12_23430) | 28548..29384 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| HZT12_RS23635 (HZT12_23435) | 30640..30891 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HZT12_RS23640 (HZT12_23440) | 30881..31162 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HZT12_RS23645 (HZT12_23445) | 31308..31631 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| HZT12_RS23650 (HZT12_23450) | 31676..31921 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| HZT12_RS23655 (HZT12_23455) | 31911..32126 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| HZT12_RS23660 (HZT12_23460) | 32219..32548 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| HZT12_RS23665 (HZT12_23465) | 32835..32984 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| HZT12_RS23670 (HZT12_23470) | 32997..33269 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| HZT12_RS23675 (HZT12_23475) | 33596..34141 | + | 546 | WP_038976855.1 | DNA distortion polypeptide 1 | - |
| HZT12_RS23680 (HZT12_23480) | 34144..35301 | + | 1158 | WP_000538023.1 | DNA distortion polypeptide 2 | - |
| HZT12_RS23685 (HZT12_23485) | 35662..36153 | + | 492 | WP_000872475.1 | transcription termination/antitermination NusG family protein | - |
| HZT12_RS23690 (HZT12_23490) | 36378..37022 | + | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| HZT12_RS23695 (HZT12_23495) | 37006..37296 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| HZT12_RS23700 (HZT12_23500) | 37320..40079 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| HZT12_RS23705 (HZT12_23505) | 40081..40818 | + | 738 | WP_000737859.1 | type IV secretion system protein | - |
| HZT12_RS23710 (HZT12_23510) | 40828..41088 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| HZT12_RS23715 (HZT12_23515) | 41100..42155 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| HZT12_RS23720 (HZT12_23520) | 42345..43067 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| HZT12_RS23725 (HZT12_23525) | 43073..44002 | + | 930 | WP_000776689.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HZT12_RS23730 (HZT12_23530) | 43999..45213 | + | 1215 | WP_001295061.1 | Type IV secretion system protein virB10 | VF |
| HZT12_RS23735 (HZT12_23535) | 45231..46268 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| HZT12_RS23740 (HZT12_23540) | 46273..48108 | + | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HZT12_RS23745 (HZT12_23545) | 48105..48500 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| HZT12_RS23750 | 48503..48835 | + | 333 | WP_000699980.1 | hypothetical protein | - |
| HZT12_RS23755 (HZT12_23555) | 49078..49893 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HZT12_RS23760 (HZT12_23560) | 50047..50955 | - | 909 | WP_000174819.1 | C45 family peptidase | - |
| HZT12_RS23765 | 51102..51188 | + | 87 | Protein_63 | micrococcal nuclease | - |
| HZT12_RS23770 (HZT12_23570) | 51603..51848 | + | 246 | WP_001243650.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|