MGE detailed information
MGE type: Prophage MGE length: 30177 bp
Accession: NZ_CP058796 Location: 3716412..3746588 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Accession: NZ_CP058796 Location: 3716412..3746588 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT12_RS18380 (3712390) | 3712390..3713541 | + | 1152 | WP_000323727.1 | trypsin-like peptidase domain-containing protein | - |
| HZT12_RS18385 (3713766) | 3713766..3714335 | - | 570 | Protein_3609 | IS5 family transposase | - |
| HZT12_RS18390 (3715457) | 3715457..3716320 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| HZT12_RS18395 (3716412) | 3716412..3717233 | + | 822 | WP_000197387.1 | DUF932 domain-containing protein | - |
| HZT12_RS18400 (3717450) | 3717450..3718151 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| HZT12_RS18405 (3718192) | 3718192..3718428 | + | 237 | WP_001144031.1 | protein YpjK | - |
| HZT12_RS18410 (3718428) | 3718428..3718872 | + | 445 | Protein_3614 | hypothetical protein | - |
| HZT12_RS18415 (3718895) | 3718895..3719362 | + | 468 | WP_001385283.1 | protein YkfB | - |
| HZT12_RS18420 (3719439) | 3719439..3719678 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| HZT12_RS18425 (3719776) | 3719776..3720234 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| HZT12_RS18430 (3720250) | 3720250..3720726 | + | 477 | WP_000811693.1 | RadC family protein | - |
| HZT12_RS18435 (3720735) | 3720735..3720956 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| HZT12_RS18440 (3720975) | 3720975..3721292 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| HZT12_RS18445 (3721313) | 3721313..3721654 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| HZT12_RS18450 (3722317) | 3722317..3722529 | + | 213 | Protein_3622 | IS3 family transposase ISEc48 | Transposase |
| HZT12_RS18455 (3722571) | 3722571..3723314 | - | 744 | WP_032170462.1 | AraC family transcriptional regulator | - |
| HZT12_RS18465 (3724575) | 3724575..3724862 | - | 288 | Protein_3625 | hypothetical protein | - |
| HZT12_RS18470 (3725024) | 3725024..3725080 | + | 57 | WP_219351404.1 | YsgD/CorL family protein | - |
| HZT12_RS18475 (3725232) | 3725232..3726182 | + | 951 | WP_000947148.1 | magnesium/cobalt transporter CorA | - |
| HZT12_RS18480 (3726336) | 3726336..3727033 | + | 698 | WP_240765259.1 | IS1 family transposase IS1R | Transposase |
| HZT12_RS18485 (3727202) | 3727202..3727975 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| HZT12_RS18490 (3728036) | 3728036..3728590 | - | 555 | WP_073514589.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HZT12_RS18495 (3728617) | 3728617..3729018 | + | 402 | WP_077897761.1 | phage tail protein | - |
| HZT12_RS18500 (3729022) | 3729022..3729441 | + | 420 | WP_000376436.1 | tail assembly chaperone | - |
| HZT12_RS18505 (3729413) | 3729413..3730015 | - | 603 | WP_033813583.1 | tail fiber assembly protein | - |
| HZT12_RS18510 (3730015) | 3730015..3730815 | - | 801 | WP_023892474.1 | phage tail protein | - |
| HZT12_RS18515 (3730819) | 3730819..3731403 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| HZT12_RS18520 (3731394) | 3731394..3732452 | - | 1059 | WP_000785311.1 | baseplate J/gp47 family protein | - |
| HZT12_RS18525 (3732439) | 3732439..3732864 | - | 426 | WP_000424747.1 | phage GP46 family protein | - |
| HZT12_RS18530 (3732864) | 3732864..3733412 | - | 549 | WP_073514591.1 | phage baseplate assembly protein V | - |
| HZT12_RS18535 (3733412) | 3733412..3734491 | - | 1080 | WP_073514592.1 | baseplate protein | - |
| HZT12_RS18540 (3734488) | 3734488..3735864 | - | 1377 | WP_073514593.1 | DNA circularization N-terminal domain-containing protein | - |
| HZT12_RS18545 (3735889) | 3735889..3737796 | - | 1908 | WP_073514594.1 | phage tail tape measure protein | - |
| HZT12_RS18550 (3737881) | 3737881..3738204 | - | 324 | WP_000571713.1 | phage tail assembly protein | - |
| HZT12_RS18555 (3738201) | 3738201..3738557 | - | 357 | WP_000090997.1 | phage tail tube protein | - |
| HZT12_RS18560 (3738557) | 3738557..3740050 | - | 1494 | WP_073514595.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| HZT12_RS18565 (3740037) | 3740037..3740204 | - | 168 | WP_065312204.1 | DUF2635 domain-containing protein | - |
| HZT12_RS18570 (3740330) | 3740330..3740527 | - | 198 | Protein_3646 | YdaS family helix-turn-helix protein | - |
| HZT12_RS18575 (3740618) | 3740618..3741292 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| HZT12_RS18580 (3741486) | 3741486..3741761 | + | 276 | WP_021563905.1 | hypothetical protein | - |
| HZT12_RS18585 (3742037) | 3742037..3742356 | + | 320 | Protein_3649 | hypothetical protein | - |
| HZT12_RS18590 (3742438) | 3742438..3742974 | + | 537 | WP_000008235.1 | 5'-deoxynucleotidase | - |
| HZT12_RS18595 (3742965) | 3742965..3743327 | + | 363 | WP_032301943.1 | phage protein | - |
| HZT12_RS18600 (3743327) | 3743327..3743632 | + | 306 | WP_000627693.1 | protein YfdT | - |
| HZT12_RS18605 (3743632) | 3743632..3743982 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| HZT12_RS18610 (3743904) | 3743904..3745022 | + | 1119 | WP_226235061.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HZT12_RS18615 (3745194) | 3745194..3746588 | + | 1395 | Protein_3655 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HZT12_RS18620 (3747469) | 3747469..3748233 | + | 765 | WP_016246899.1 | hypothetical protein | - |
| HZT12_RS18625 (3748695) | 3748695..3749315 | + | 621 | WP_210761266.1 | inovirus Gp2 family protein | - |
| HZT12_RS18630 (3749389) | 3749389..3749883 | - | 495 | WP_210761268.1 | HigA family addiction module antidote protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|