MGE detailed information
MGE type: Genomic_island MGE length: 24109 bp
Accession: NZ_CP058796 Location: 2401278..2425386 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Accession: NZ_CP058796 Location: 2401278..2425386 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT12_RS11935 (2401278) | 2401278..2401544 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HZT12_RS11940 (2401544) | 2401544..2402866 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HZT12_RS11945 (2403168) | 2403168..2404508 | + | 1341 | WP_001459747.1 | hypothetical protein ; Integrase | Integrase |
| HZT12_RS11950 (2404495) | 2404495..2404917 | + | 423 | WP_240765156.1 | hypothetical protein | - |
| HZT12_RS11955 (2404951) | 2404951..2405648 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| HZT12_RS11960 (2405658) | 2405658..2406836 | + | 1179 | WP_240765518.1 | hypothetical protein ; Integrase | Integrase |
| HZT12_RS11965 (2406820) | 2406820..2409186 | + | 2367 | WP_000788503.1 | hypothetical protein ; Integrase | Integrase |
| HZT12_RS11970 (2409186) | 2409186..2409620 | + | 435 | WP_001214175.1 | hypothetical protein | - |
| HZT12_RS11975 (2409825) | 2409825..2410157 | - | 333 | WP_024189840.1 | helix-turn-helix transcriptional regulator | - |
| HZT12_RS11980 (2410255) | 2410255..2410815 | + | 561 | WP_001543770.1 | hypothetical protein | - |
| HZT12_RS11985 (2411123) | 2411123..2411419 | + | 297 | WP_000379666.1 | helix-turn-helix transcriptional regulator | - |
| HZT12_RS11990 (2411508) | 2411508..2412443 | - | 936 | WP_016245986.1 | hypothetical protein | - |
| HZT12_RS11995 (2412392) | 2412392..2412694 | + | 303 | WP_240765157.1 | SEC-C metal-binding domain-containing protein | - |
| HZT12_RS12005 (2414086) | 2414086..2417412 | + | 3327 | WP_240765158.1 | ATP-binding protein | - |
| HZT12_RS12010 (2417548) | 2417548..2418690 | + | 1143 | WP_001459743.1 | ATP-binding protein | - |
| HZT12_RS12015 (2419053) | 2419053..2420266 | + | 1214 | WP_164549649.1 | IS3 family transposase IS629 | Transposase |
| HZT12_RS12020 (2420269) | 2420269..2420991 | - | 723 | WP_240765159.1 | hypothetical protein | - |
| HZT12_RS12025 (2421082) | 2421082..2421237 | - | 156 | Protein_2359 | transposase | - |
| HZT12_RS12030 (2421412) | 2421412..2422520 | + | 1109 | Protein_2360 | IS3 family transposase ISBcen15 | Transposase |
| HZT12_RS12035 (2422646) | 2422646..2422969 | - | 324 | Protein_2361 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| HZT12_RS12040 (2422983) | 2422983..2423069 | + | 87 | Protein_2362 | integrase | - |
| HZT12_RS12045 (2423168) | 2423168..2423944 | - | 777 | WP_016245981.1 | MBL fold metallo-hydrolase | - |
| HZT12_RS12050 (2424015) | 2424015..2424968 | - | 954 | WP_016245980.1 | helix-turn-helix domain-containing protein | - |
| HZT12_RS12055 (2424988) | 2424988..2425386 | - | 399 | WP_000798353.1 | ester cyclase | - |
| HZT12_RS12060 (2425585) | 2425585..2425797 | - | 213 | Protein_2366 | recombinase family protein | - |
| HZT12_RS12065 (2425836) | 2425836..2425916 | - | 81 | WP_227538286.1 | hypothetical protein | - |
| HZT12_RS12070 (2426191) | 2426191..2426943 | - | 753 | WP_000734115.1 | alpha/beta hydrolase | - |
| HZT12_RS12075 (2427185) | 2427185..2428057 | + | 873 | WP_000090196.1 | DMT family transporter | - |
| HZT12_RS12080 (2428188) | 2428188..2429411 | + | 1224 | WP_000872613.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| HZT12_RS12085 (2429597) | 2429597..2430370 | - | 774 | WP_001091224.1 | SDR family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|