MGE detailed information
MGE type: Prophage MGE length: 27914 bp
Accession: NZ_CP058796 Location: 2332048..2359961 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Accession: NZ_CP058796 Location: 2332048..2359961 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT12_RS11505 (2328297) | 2328297..2330723 | - | 2427 | WP_016242148.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| HZT12_RS11510 (2330922) | 2330922..2331227 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| HZT12_RS11515 (2331335) | 2331335..2332045 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HZT12_RS11520 (2332048) | 2332048..2332608 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HZT12_RS11525 (2332643) | 2332643..2332984 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HZT12_RS11530 (2333119) | 2333119..2333445 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| HZT12_RS11535 (2333651) | 2333651..2334865 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HZT12_RS11540 (2334877) | 2334877..2335371 | + | 495 | Protein_2262 | alcohol dehydrogenase catalytic domain-containing protein | - |
| HZT12_RS11550 (2336465) | 2336465..2336886 | + | 422 | Protein_2264 | hypothetical protein | - |
| HZT12_RS11555 (2337521) | 2337521..2338862 | + | 1342 | Protein_2265 | ISNCY family transposase ISCARN112 | Transposase |
| HZT12_RS11560 (2339299) | 2339299..2339511 | - | 213 | Protein_2266 | FlxA-like family protein | - |
| HZT12_RS11565 (2339575) | 2339575..2340737 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| HZT12_RS11570 (2340767) | 2340767..2340892 | - | 126 | Protein_2268 | protein FlxA | - |
| HZT12_RS11575 (2341095) | 2341095..2341400 | - | 306 | WP_001326990.1 | protein YdfV | - |
| HZT12_RS11580 (2341425) | 2341425..2341664 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HZT12_RS11585 (2341664) | 2341664..2341951 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HZT12_RS11590 (2342023) | 2342023..2342178 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HZT12_RS11595 (2342395) | 2342395..2342646 | + | 252 | WP_000980994.1 | protein Rem | - |
| HZT12_RS11600 (2342713) | 2342713..2342991 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| HZT12_RS11605 (2342993) | 2342993..2344042 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| HZT12_RS11610 (2344056) | 2344056..2344808 | + | 753 | WP_001047135.1 | antitermination protein | - |
| HZT12_RS11615 (2345086) | 2345086..2345175 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| HZT12_RS11620 (2345230) | 2345230..2345442 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HZT12_RS11625 (2345743) | 2345743..2345958 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HZT12_RS11630 (2346322) | 2346322..2346492 | - | 171 | WP_213044735.1 | YnfU family zinc-binding protein | - |
| HZT12_RS11635 (2346712) | 2346712..2346927 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HZT12_RS11640 (2346932) | 2346932..2347243 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| HZT12_RS11645 (2347240) | 2347240..2347773 | + | 534 | WP_001092971.1 | lysozyme | - |
| HZT12_RS11650 (2347770) | 2347770..2348267 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HZT12_RS11655 (2348631) | 2348631..2348843 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HZT12_RS11660 (2348854) | 2348854..2349042 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HZT12_RS11665 (2349045) | 2349045..2349110 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| HZT12_RS11670 (2349115) | 2349115..2349345 | + | 231 | WP_000720962.1 | protein YnfN | - |
| HZT12_RS11675 (2349517) | 2349517..2349690 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HZT12_RS11680 (2349842) | 2349842..2350252 | - | 411 | WP_240765516.1 | DUF1398 domain-containing protein | - |
| HZT12_RS11685 (2350310) | 2350310..2350543 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HZT12_RS11690 (2350932) | 2350932..2351477 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HZT12_RS11695 (2351452) | 2351452..2351694 | + | 243 | Protein_2293 | phage terminase large subunit family protein | - |
| HZT12_RS11700 (2351691) | 2351691..2352599 | + | 909 | Protein_2294 | phage tail protein | - |
| HZT12_RS11705 (2352611) | 2352611..2353167 | + | 557 | Protein_2295 | tail fiber assembly protein | - |
| HZT12_RS11710 (2353265) | 2353265..2353855 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HZT12_RS11715 (2354172) | 2354172..2354405 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HZT12_RS11720 (2354474) | 2354474..2354587 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HZT12_RS11725 (2355192) | 2355192..2356475 | + | 1284 | Protein_2299 | MHS family MFS transporter YdfJ | - |
| HZT12_RS11730 (2356564) | 2356564..2358024 | + | 1461 | WP_000527800.1 | mannitol dehydrogenase family protein | - |
| HZT12_RS11735 (2358060) | 2358060..2358263 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HZT12_RS11740 (2358440) | 2358440..2359126 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| HZT12_RS11745 (2359215) | 2359215..2359961 | - | 747 | WP_001324973.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| HZT12_RS11750 (2360098) | 2360098..2362143 | + | 2046 | WP_000210376.1 | peptidyl-dipeptidase Dcp | - |
| HZT12_RS11755 (2362188) | 2362188..2362706 | - | 519 | WP_016242129.1 | 2-oxo-tetronate isomerase | - |
| HZT12_RS11760 (2362982) | 2362982..2363374 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| HZT12_RS11765 (2363629) | 2363629..2364519 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| HZT12_RS11770 (2364634) | 2364634..2364738 | - | 105 | WP_211180496.1 | protein MgtT | - |
| HZT12_RS11775 (2364738) | 2364738..2364833 | - | 96 | WP_000901367.1 | protein MgtS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|