MGE detailed information
MGE type: IScluster/Tn MGE length: 7202 bp
Accession: NZ_CP058796 Location: 1855959..1863160 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Accession: NZ_CP058796 Location: 1855959..1863160 Organism: Shigella flexneri strain STLIN_8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT12_RS08950 (1851081) | 1851081..1851308 | + | 228 | WP_000234896.1 | sulfurtransferase TusA | - |
| HZT12_RS08955 (1851351) | 1851351..1852778 | - | 1428 | WP_077527041.1 | exodeoxyribonuclease I | - |
| HZT12_RS08960 (1852987) | 1852987..1854153 | + | 1167 | WP_000830156.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| HZT12_RS08965 (1854272) | 1854272..1854745 | + | 474 | WP_001105415.1 | DNA gyrase inhibitor SbmC | - |
| HZT12_RS08970 (1854943) | 1854943..1855770 | + | 828 | Protein_1761 | FUSC family protein | - |
| HZT12_RS08975 (1855959) | 1855959..1857499 | + | 1541 | Protein_1762 | IS21 family transposase ISEc12 | Transposase |
| HZT12_RS08980 (1857514) | 1857514..1858260 | + | 747 | WP_240765510.1 | IS21 family transposase ISEc12 | Transposase |
| HZT12_RS08985 (1858338) | 1858338..1858589 | + | 252 | Protein_1764 | hypothetical protein | - |
| HZT12_RS08990 (1858761) | 1858761..1859090 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| HZT12_RS08995 (1859191) | 1859191..1859325 | - | 135 | WP_001297944.1 | EutP/PduV family microcompartment system protein | - |
| HZT12_RS09000 (1859445) | 1859445..1859573 | + | 129 | Protein_1767 | transposase domain-containing protein | - |
| HZT12_RS09005 (1859862) | 1859862..1859942 | - | 81 | Protein_1768 | hypothetical protein | - |
| HZT12_RS09010 (1859988) | 1859988..1860182 | - | 195 | WP_000988600.1 | DUF5983 family protein | - |
| HZT12_RS09015 (1860179) | 1860179..1860553 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| HZT12_RS09020 (1860642) | 1860642..1861010 | - | 369 | WP_001285585.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| HZT12_RS09025 (1861084) | 1861084..1861305 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| HZT12_RS09030 (1861368) | 1861368..1861634 | - | 267 | Protein_1773 | JAB domain-containing protein | - |
| HZT12_RS09040 (1862381) | 1862381..1862848 | - | 468 | Protein_1775 | PfkB family carbohydrate kinase | - |
| HZT12_RS09045 (1863044) | 1863044..1863382 | - | 339 | Protein_1776 | transposase | - |
| HZT12_RS09050 (1864270) | 1864270..1864434 | + | 165 | WP_001128468.1 | hypothetical protein | - |
| HZT12_RS09055 (1864407) | 1864407..1864595 | + | 189 | Protein_1778 | IS4 family transposase | - |
| HZT12_RS09060 (1864574) | 1864574..1864747 | + | 174 | Protein_1779 | cobalamin biosynthesis protein | - |
| HZT12_RS09065 (1864899) | 1864899..1865444 | + | 546 | WP_000973176.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| HZT12_RS09070 (1865441) | 1865441..1866184 | + | 744 | WP_112034163.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| HZT12_RS09075 (1866196) | 1866196..1867275 | + | 1080 | WP_001459858.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|