MGE detailed information
MGE type: Prophage MGE length: 33527 bp
Accession: NZ_CP058786 Location: 2286244..2319770 Organism: Shigella flexneri strain STLIN_4 Replicon: chromosome
Accession: NZ_CP058786 Location: 2286244..2319770 Organism: Shigella flexneri strain STLIN_4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT07_RS11150 (2281625) | 2281625..2282335 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HZT07_RS11155 (2282338) | 2282338..2282898 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HZT07_RS11160 (2282933) | 2282933..2283274 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HZT07_RS11165 (2283409) | 2283409..2283735 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| HZT07_RS11170 (2283941) | 2283941..2285155 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HZT07_RS11175 (2285167) | 2285167..2286186 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| HZT07_RS11180 (2286374) | 2286374..2287654 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HZT07_RS11185 (2287689) | 2287689..2287940 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| HZT07_RS11190 (2288013) | 2288013..2289722 | - | 1710 | Protein_2194 | 3'-5' exoribonuclease | - |
| HZT07_RS11195 (2289710) | 2289710..2289967 | + | 258 | Protein_2195 | hypothetical protein | - |
| HZT07_RS11200 (2290008) | 2290008..2290430 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| HZT07_RS11205 (2290427) | 2290427..2290916 | + | 490 | Protein_2197 | class I SAM-dependent methyltransferase | - |
| HZT07_RS11210 (2291299) | 2291299..2292838 | - | 1540 | Protein_2198 | IS66 family transposase ISEc22 | Transposase |
| HZT07_RS11215 (2292887) | 2292887..2293117 | - | 231 | Protein_2199 | IS66 family insertion sequence element accessory protein TnpB | - |
| HZT07_RS11220 (2293123) | 2293123..2293245 | - | 123 | Protein_2200 | IS66 family transposase ISEc22 | Transposase |
| HZT07_RS11225 (2293488) | 2293488..2293909 | + | 422 | Protein_2201 | hypothetical protein | - |
| HZT07_RS11230 (2294544) | 2294544..2295857 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| HZT07_RS11235 (2296294) | 2296294..2296626 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| HZT07_RS11240 (2296829) | 2296829..2297134 | - | 306 | WP_001326990.1 | protein YdfV | - |
| HZT07_RS11245 (2297159) | 2297159..2297398 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HZT07_RS11250 (2297398) | 2297398..2297685 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HZT07_RS11255 (2297757) | 2297757..2297912 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HZT07_RS11260 (2298129) | 2298129..2298380 | + | 252 | WP_000980994.1 | protein Rem | - |
| HZT07_RS11265 (2298447) | 2298447..2298725 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| HZT07_RS11270 (2298727) | 2298727..2299776 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| HZT07_RS11275 (2299790) | 2299790..2300542 | + | 753 | WP_001047135.1 | antitermination protein | - |
| HZT07_RS11280 (2300820) | 2300820..2300909 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| HZT07_RS11285 (2300964) | 2300964..2301176 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HZT07_RS11290 (2301477) | 2301477..2301692 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HZT07_RS11295 (2302056) | 2302056..2302226 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| HZT07_RS11300 (2302446) | 2302446..2302661 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HZT07_RS11305 (2302666) | 2302666..2302977 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| HZT07_RS11310 (2302974) | 2302974..2303507 | + | 534 | WP_001092971.1 | lysozyme | - |
| HZT07_RS11315 (2303504) | 2303504..2304001 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HZT07_RS11320 (2304364) | 2304364..2304576 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HZT07_RS11325 (2304587) | 2304587..2304775 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HZT07_RS11330 (2304778) | 2304778..2304843 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| HZT07_RS11335 (2304848) | 2304848..2305078 | + | 231 | WP_000720962.1 | protein YnfN | - |
| HZT07_RS11340 (2305250) | 2305250..2305423 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HZT07_RS11345 (2305575) | 2305575..2305985 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HZT07_RS11350 (2306043) | 2306043..2306276 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HZT07_RS11355 (2306665) | 2306665..2307210 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HZT07_RS11360 (2307185) | 2307185..2308990 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| HZT07_RS11365 (2308990) | 2308990..2309565 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| HZT07_RS11370 (2309663) | 2309663..2310253 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HZT07_RS11375 (2310570) | 2310570..2310803 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HZT07_RS11380 (2310872) | 2310872..2310985 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HZT07_RS11385 (2311506) | 2311506..2312873 | + | 1368 | Protein_2233 | MHS family MFS transporter | - |
| HZT07_RS11390 (2312962) | 2312962..2314422 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| HZT07_RS11395 (2314457) | 2314457..2314660 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HZT07_RS11400 (2314837) | 2314837..2315523 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| HZT07_RS11405 (2315612) | 2315612..2316358 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| HZT07_RS11410 (2316495) | 2316495..2318540 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| HZT07_RS11415 (2318584) | 2318584..2319102 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| HZT07_RS11420 (2319378) | 2319378..2319770 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| HZT07_RS11425 (2320025) | 2320025..2320915 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| HZT07_RS11430 (2321030) | 2321030..2321134 | - | 105 | WP_211180496.1 | protein MgtT | - |
| HZT07_RS11435 (2321134) | 2321134..2321229 | - | 96 | WP_000901367.1 | protein MgtS | - |
| HZT07_RS11440 (2321356) | 2321356..2322543 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| HZT07_RS11445 (2322738) | 2322738..2323636 | + | 899 | Protein_2245 | O-acetylserine/cysteine exporter | - |
| HZT07_RS11450 (2323667) | 2323667..2323885 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| HZT07_RS11455 (2323917) | 2323917..2324300 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| HZT07_RS11460 (2324320) | 2324320..2324754 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|