MGE detailed information
MGE type: Mobilizable plasmid MGE length: 99490 bp
Accession: NZ_CP058781 Location: 1..99490 Organism: Shigella flexneri strain STLIN_17 Replicon: plasmid unnamed1
Accession: NZ_CP058781 Location: 1..99490 Organism: Shigella flexneri strain STLIN_17 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT03_RS22555 (HZT03_22395) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| HZT03_RS22560 (HZT03_22400) | 1205..2173 | + | 969 | WP_077248828.1 | IS5 family transposase IS903B | Transposase |
| HZT03_RS22565 (HZT03_22405) | 2340..2630 | - | 291 | WP_001471781.1 | hypothetical protein | - |
| HZT03_RS22570 (HZT03_22410) | 3341..3676 | + | 336 | WP_001039462.1 | plasmid stabilization protein StbA | - |
| HZT03_RS22575 (HZT03_22415) | 3685..3876 | + | 192 | WP_001515192.1 | hypothetical protein | - |
| HZT03_RS22580 (HZT03_22420) | 3887..4470 | - | 584 | Protein_5 | IS1 family transposase | - |
| HZT03_RS22585 (HZT03_22425) | 5004..5759 | + | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| HZT03_RS22590 (HZT03_22430) | 6028..6373 | + | 346 | Protein_7 | IS1 family transposase | - |
| HZT03_RS22595 (HZT03_22435) | 6884..7024 | + | 141 | WP_160784086.1 | hypothetical protein | - |
| HZT03_RS22600 (HZT03_22440) | 7097..7366 | + | 270 | WP_000079938.1 | type II toxin-antitoxin system antitoxin YacA | - |
| HZT03_RS23560 (HZT03_22445) | 7366..7587 | + | 222 | Protein_10 | IS6 family transposase IS15DI | Transposase |
| HZT03_RS22610 (HZT03_22450) | 7588..8073 | + | 486 | Protein_11 | IS6 family transposase IS15DI | Transposase |
| HZT03_RS22615 (HZT03_22455) | 8175..8654 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| HZT03_RS22620 (HZT03_22460) | 8724..11876 | - | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| HZT03_RS22625 (HZT03_22465) | 11900..13075 | - | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| HZT03_RS22630 (HZT03_22470) | 13395..14099 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT03_RS22635 (HZT03_22475) | 14293..14679 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| HZT03_RS22645 (HZT03_22485) | 15776..16168 | - | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| HZT03_RS22650 (HZT03_22490) | 16364..17218 | + | 855 | Protein_19 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HZT03_RS22655 (HZT03_22495) | 17187..17867 | - | 681 | WP_223375237.1 | restriction endonuclease | - |
| HZT03_RS22660 (HZT03_22500) | 17923..18234 | - | 312 | WP_001452736.1 | hypothetical protein | - |
| HZT03_RS22665 (HZT03_22505) | 18270..18548 | - | 279 | WP_063107378.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HZT03_RS22670 (HZT03_22510) | 18607..19311 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT03_RS22675 (HZT03_22515) | 19365..21674 | + | 2310 | Protein_24 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| HZT03_RS22680 (HZT03_22520) | 21750..22460 | - | 711 | WP_057102336.1 | arsenical resistance protein ArsH | - |
| HZT03_RS22685 (HZT03_22525) | 22561..22884 | - | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HZT03_RS22690 (HZT03_22530) | 22990..24123 | + | 1134 | WP_058650130.1 | permease | - |
| HZT03_RS22695 (HZT03_22535) | 24416..25033 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| HZT03_RS22700 (HZT03_22540) | 25225..26781 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| HZT03_RS22705 (HZT03_22545) | 27044..27634 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| HZT03_RS22710 (HZT03_22550) | 27634..27891 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| HZT03_RS22715 (HZT03_22555) | 28245..30383 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| HZT03_RS22720 (HZT03_22560) | 30545..30961 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZT03_RS22725 (HZT03_22565) | 30958..31188 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HZT03_RS22730 (HZT03_22570) | 31484..31756 | + | 273 | WP_061602529.1 | hypothetical protein | - |
| HZT03_RS22735 (HZT03_22575) | 31803..32507 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZT03_RS22740 (HZT03_22580) | 32554..32988 | - | 435 | WP_113403791.1 | IS607 family transposase ISChh1 | Transposase |
| HZT03_RS22745 (HZT03_22585) | 33060..33410 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HZT03_RS22750 (HZT03_22590) | 33424..33699 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HZT03_RS22755 (HZT03_22595) | 33735..34157 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HZT03_RS22760 (HZT03_22600) | 34209..35903 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HZT03_RS22765 (HZT03_22605) | 35921..36283 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HZT03_RS22770 (HZT03_22610) | 36280..36516 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HZT03_RS22775 (HZT03_22615) | 36552..37220 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| HZT03_RS22780 (HZT03_22620) | 37295..38545 | + | 1251 | Protein_45 | transposase | - |
| HZT03_RS22785 (HZT03_22625) | 38610..39314 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT03_RS22790 (HZT03_22630) | 39504..40319 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HZT03_RS22795 (HZT03_22635) | 40470..41174 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT03_RS22800 (HZT03_22640) | 41180..41320 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| HZT03_RS22805 (HZT03_22645) | 41806..42543 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZT03_RS22810 (HZT03_22650) | 42540..42764 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| HZT03_RS22815 (HZT03_22655) | 42975..44468 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| HZT03_RS22820 (HZT03_22660) | 44499..45383 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HZT03_RS22825 (HZT03_22665) | 45600..46814 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| HZT03_RS22830 (HZT03_22670) | 46842..47147 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HZT03_RS22835 (HZT03_22675) | 47259..47447 | + | 189 | Protein_56 | IS91 family transposase | - |
| HZT03_RS22840 (HZT03_22680) | 47414..48613 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| HZT03_RS22845 (HZT03_22685) | 48719..49369 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZT03_RS22850 (HZT03_22690) | 49434..52439 | - | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HZT03_RS22855 (HZT03_22695) | 52601..53158 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HZT03_RS22860 (HZT03_22700) | 53341..54201 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HZT03_RS22865 (HZT03_22705) | 54388..55779 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| HZT03_RS22870 (HZT03_22710) | 55816..56388 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| HZT03_RS22875 (HZT03_22715) | 56525..57070 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| HZT03_RS22880 (HZT03_22720) | 57233..57475 | + | 243 | WP_000844627.1 | transposase | - |
| HZT03_RS22885 (HZT03_22725) | 57507..58157 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZT03_RS22890 (HZT03_22730) | 58263..59462 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HZT03_RS22895 (HZT03_22735) | 59494..60378 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| HZT03_RS22900 (HZT03_22740) | 60516..60908 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HZT03_RS22905 (HZT03_22745) | 60912..62663 | + | 1752 | Protein_70 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZT03_RS22910 (HZT03_22750) | 62764..64356 | - | 1593 | Protein_71 | multicopper oxidase PcoA | - |
| HZT03_RS22915 (HZT03_22755) | 64591..65040 | + | 450 | WP_001023231.1 | hypothetical protein | - |
| HZT03_RS22920 (HZT03_22760) | 65315..66052 | + | 738 | WP_000287499.1 | Murein DD-endopeptidase MepM | VF |
| HZT03_RS22925 (HZT03_22765) | 66086..66283 | - | 198 | WP_000843501.1 | DUF2933 domain-containing protein | - |
| HZT03_RS22930 (HZT03_22770) | 66324..68801 | - | 2478 | WP_011251358.1 | Ag(+)-translocating P-type ATPase SilP | - |
| HZT03_RS22935 (HZT03_22775) | 68899..69339 | - | 441 | WP_000758221.1 | DUF411 domain-containing protein | - |
| HZT03_RS22940 (HZT03_22780) | 69426..72572 | - | 3147 | WP_011251357.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| HZT03_RS22945 (HZT03_22785) | 72583..73875 | - | 1293 | WP_001398209.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| HZT03_RS22950 (HZT03_22790) | 73989..74342 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| HZT03_RS22955 (HZT03_22795) | 74370..75755 | - | 1386 | WP_063107410.1 | Cation efflux system protein CusC | VF |
| HZT03_RS22960 (HZT03_22800) | 75945..76625 | + | 681 | WP_000697965.1 | Transcriptional regulatory protein CusR | VF |
| HZT03_RS22965 (HZT03_22805) | 76618..78093 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| HZT03_RS22970 (HZT03_22810) | 78344..78775 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| HZT03_RS22975 (HZT03_22815) | 78919..79269 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| HZT03_RS22980 (HZT03_22820) | 79657..80565 | - | 909 | WP_001372261.1 | HNH endonuclease | - |
| HZT03_RS22985 (HZT03_22825) | 81203..82177 | + | 975 | WP_011251353.1 | sensor domain-containing diguanylate cyclase | - |
| HZT03_RS22990 (HZT03_22830) | 83108..83779 | + | 672 | WP_000796235.1 | hypothetical protein | - |
| HZT03_RS22995 (HZT03_22835) | 83799..84587 | + | 789 | WP_022631000.1 | site-specific integrase | - |
| HZT03_RS23000 | 84645..84836 | - | 192 | WP_001326966.1 | hypothetical protein | - |
| HZT03_RS23005 (HZT03_22840) | 84881..85778 | - | 898 | Protein_90 | IS3 family transposase ISEhe3 | Transposase |
| HZT03_RS23010 (HZT03_22845) | 85787..86938 | - | 1152 | Protein_91 | IS30 family transposase IS30D | Transposase |
| HZT03_RS23015 (HZT03_22850) | 87020..87169 | - | 150 | Protein_92 | IS3 family transposase ISEhe3 | Transposase |
| HZT03_RS23020 (HZT03_22855) | 87316..87597 | + | 282 | WP_000639434.1 | hypothetical protein | - |
| HZT03_RS23025 (HZT03_22860) | 87698..88396 | - | 699 | Protein_94 | IS1 family transposase IS1R | Transposase |
| HZT03_RS23030 (HZT03_22865) | 88506..89831 | + | 1326 | WP_022631019.1 | reactive chlorine resistance oxidoreductase RclA | - |
| HZT03_RS23035 (HZT03_22870) | 90038..90736 | + | 699 | Protein_96 | IS1 family transposase | - |
| HZT03_RS23040 (HZT03_22875) | 90766..91113 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| HZT03_RS23045 (HZT03_22880) | 91162..92699 | + | 1538 | Protein_98 | IS66 family transposase ISEc22 | Transposase |
| HZT03_RS23050 (HZT03_22885) | 94642..95340 | + | 699 | Protein_99 | IS1 family transposase IS1R | Transposase |
| HZT03_RS23055 (HZT03_22890) | 95359..96204 | + | 846 | Protein_100 | IS3 family transposase IS911 | Transposase |
| HZT03_RS23060 (HZT03_22895) | 96613..97584 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HZT03_RS23065 (HZT03_22900) | 97584..98750 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|